Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZNF92P2-201ENST00000600543 1059 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AC107294.3-201ENST00000609211 526 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 U1.23-201ENST00000610293 146 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 VIS1.1-201ENST00000610517 203 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 RNU1-68P-201ENST00000615382 146 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AC003001.2-201ENST00000616294 831 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AC068831.7-201ENST00000616954 363 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 U1.39-201ENST00000621562 146 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AC106730.3-201ENST00000624568 641 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLDN6P56747 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
CLDN6P56747 MIR148B-201ENST00000362252 99 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 U3.11-201ENST00000364476 212 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 RNU1-101P-201ENST00000391171 127 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 AL445529.1-201ENST00000398713 389 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 RNU4-27P-201ENST00000410889 139 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.86□□□□□ -1.95
CLDN6P56747 OR51A3P-201ENST00000413596 924 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLDN6P56747 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.86□□□□□ -1.95
CLDN6P56747 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 MYL8P-204ENST00000431574 518 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLDN6P56747 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.86□□□□□ -1.95
CLDN6P56747 OR5H3P-201ENST00000502817 919 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.86□□□□□ -1.95
CLDN6P56747 MTND3P24-201ENST00000506306 329 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.86□□□□□ -1.95
CLDN6P56747 SETP12-201ENST00000514068 805 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 RNU6-1102P-201ENST00000516149 96 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.86□□□□□ -1.95
CLDN6P56747 HMGB1P1-201ENST00000522557 636 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLDN6P56747 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.86□□□□□ -1.95
CLDN6P56747 AP000916.1-201ENST00000533869 835 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 LSM6P2-201ENST00000552208 177 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.86□□□□□ -1.95
CLDN6P56747 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.86□□□□□ -1.95
CLDN6P56747 AL731537.2-201ENST00000561565 951 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 LINC00557-201ENST00000563184 1279 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 MTCO3P24-201ENST00000572729 782 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.86□□□□□ -1.95
CLDN6P56747 MIR4435-1-201ENST00000582552 80 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.86□□□□□ -1.95
CLDN6P56747 AC092474.3-201ENST00000603022 568 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLDN6P56747 CYCSP41-201ENST00000616920 296 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 AC007318.2-201ENST00000620999 243 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 AC095031.1-201ENST00000623685 672 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CLDN6P56747 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.86□□□□□ -1.95
CLDN6P56747 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.86□□□□□ -1.95
CLDN6P56747 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLDN6P56747 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLDN6P56747 AC111188.2-201ENST00000529697 1387 ntBASIC2.86□□□□□ -1.95
CLDN6P56747 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
CLDN6P56747 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN6P56747 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN6P56747 RNU6-730P-201ENST00000383954 104 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN6P56747 RPL21P40-201ENST00000428586 483 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN6P56747 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN6P56747 AP002884.2-201ENST00000471647 395 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 RPS4XP6-201ENST00000477670 797 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN6P56747 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.85□□□□□ -1.95
CLDN6P56747 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN6P56747 MTCYBP37-201ENST00000510642 1133 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 AC105914.1-201ENST00000511798 226 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 RNU6-711P-201ENST00000517255 106 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN6P56747 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN6P56747 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN6P56747 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN6P56747 COX6CP3-201ENST00000580869 223 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.85□□□□□ -1.95
CLDN6P56747 AC008962.1-201ENST00000605729 304 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 AC006329.2-201ENST00000611491 394 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN6P56747 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN6P56747 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN6P56747 AC093908.1-201ENST00000623125 8092 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 MTND5P27-201ENST00000428871 1720 ntBASIC2.85□□□□□ -1.95
CLDN6P56747 AC130650.2-201ENST00000618736 2403 ntBASIC2.84□□□□□ -1.95
CLDN6P56747 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN6P56747 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN6P56747 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN6P56747 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN6P56747 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN6P56747 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN6P56747 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN6P56747 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CLDN6P56747 RPL7P25-201ENST00000404151 721 ntBASIC2.84□□□□□ -1.95
CLDN6P56747 RNA5SP508-201ENST00000411327 119 ntBASIC2.84□□□□□ -1.95
CLDN6P56747 RPL7P8-201ENST00000411964 730 ntBASIC2.84□□□□□ -1.95
CLDN6P56747 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.84□□□□□ -1.95
CLDN6P56747 RPS6P14-201ENST00000425165 719 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms