Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 VDAC1P3-201ENST00000434069 851 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH13P55290 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH13P55290 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH13P55290 RPS3AP22-201ENST00000488297 769 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AL024509.2-201ENST00000493462 493 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH13P55290 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH13P55290 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH13P55290 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.6□□□□□ -1.83
CDH13P55290 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH13P55290 AC087276.1-201ENST00000529659 480 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AC068587.4-201ENST00000533893 186 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.6□□□□□ -1.83
CDH13P55290 AL121766.1-201ENST00000547436 487 ntBASIC3.6□□□□□ -1.83
CDH13P55290 PARP1P2-201ENST00000556806 195 ntBASIC3.6□□□□□ -1.83
CDH13P55290 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH13P55290 MIR4738-201ENST00000579134 87 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AL353778.1-201ENST00000603149 408 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AL590392.1-201ENST00000604960 446 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AL139344.1-201ENST00000605228 195 ntBASIC3.6□□□□□ -1.83
CDH13P55290 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.6□□□□□ -1.83
CDH13P55290 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CDH13P55290 AL360181.4-201ENST00000621752 134 ntBASIC3.6□□□□□ -1.83
CDH13P55290 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH13P55290 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH13P55290 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH13P55290 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH13P55290 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH13P55290 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CDH13P55290 AC007656.2-201ENST00000624902 4547 ntBASIC3.6□□□□□ -1.83
CDH13P55290 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH13P55290 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH13P55290 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH13P55290 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH13P55290 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH13P55290 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH13P55290 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH13P55290 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH13P55290 RNU6-600P-201ENST00000362524 99 ntBASIC3.59□□□□□ -1.83
CDH13P55290 SNORA70.2-201ENST00000364506 135 ntBASIC3.59□□□□□ -1.83
CDH13P55290 MIR30B-201ENST00000384850 88 ntBASIC3.59□□□□□ -1.83
CDH13P55290 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH13P55290 RNU2-71P-201ENST00000411395 189 ntBASIC3.59□□□□□ -1.83
CDH13P55290 VPS26BP1-201ENST00000417155 755 ntBASIC3.59□□□□□ -1.83
CDH13P55290 DUTP6-201ENST00000425573 462 ntBASIC3.59□□□□□ -1.83
CDH13P55290 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH13P55290 CETN4P-201ENST00000432407 469 ntBASIC3.59□□□□□ -1.83
CDH13P55290 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH13P55290 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH13P55290 RPL21P89-201ENST00000444021 467 ntBASIC3.59□□□□□ -1.83
CDH13P55290 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH13P55290 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH13P55290 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH13P55290 RPL7L1P8-201ENST00000469911 741 ntBASIC3.59□□□□□ -1.83
CDH13P55290 VN1R17P-201ENST00000472048 1090 ntBASIC3.59□□□□□ -1.83
CDH13P55290 AC092451.1-201ENST00000480211 153 ntBASIC3.59□□□□□ -1.83
CDH13P55290 RPS3AP50-201ENST00000487064 803 ntBASIC3.59□□□□□ -1.83
CDH13P55290 LTV1P1-201ENST00000510683 1237 ntBASIC3.59□□□□□ -1.83
CDH13P55290 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH13P55290 MRPS33P3-201ENST00000513456 322 ntBASIC3.59□□□□□ -1.83
CDH13P55290 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH13P55290 RN7SKP244-201ENST00000516513 307 ntBASIC3.59□□□□□ -1.83
CDH13P55290 RNU6-714P-201ENST00000516963 103 ntBASIC3.59□□□□□ -1.83
CDH13P55290 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH13P55290 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH13P55290 AC023161.2-201ENST00000551218 780 ntBASIC3.59□□□□□ -1.83
CDH13P55290 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH13P55290 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH13P55290 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH13P55290 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH13P55290 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH13P55290 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH13P55290 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH13P55290 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH13P55290 AC022916.3-201ENST00000592961 742 ntBASIC3.59□□□□□ -1.83
CDH13P55290 AC006254.3-201ENST00000603353 884 ntBASIC3.59□□□□□ -1.83
CDH13P55290 RNVU1-4-201ENST00000612985 164 ntBASIC3.59□□□□□ -1.83
CDH13P55290 MIR6875-201ENST00000617506 72 ntBASIC3.59□□□□□ -1.83
CDH13P55290 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.59□□□□□ -1.83
CDH13P55290 AC015967.1-201ENST00000619893 476 ntBASIC3.59□□□□□ -1.83
CDH13P55290 Z99129.2-201ENST00000619967 314 ntBASIC3.59□□□□□ -1.83
CDH13P55290 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.59□□□□□ -1.83
CDH13P55290 AL353748.2-201ENST00000622148 471 ntBASIC3.59□□□□□ -1.83
CDH13P55290 AL356596.1-201ENST00000624230 379 ntBASIC3.59□□□□□ -1.83
CDH13P55290 AC009039.2-201ENST00000624524 529 ntBASIC3.59□□□□□ -1.83
CDH13P55290 MFSD8-236ENST00000641509 4050 ntBASIC3.59□□□□□ -1.83
CDH13P55290 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.59□□□□□ -1.84
CDH13P55290 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.59□□□□□ -1.84
CDH13P55290 AC024560.2-201ENST00000507981 1497 ntBASIC3.59□□□□□ -1.84
CDH13P55290 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.59□□□□□ -1.84
CDH13P55290 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDH13P55290 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDH13P55290 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDH13P55290 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CDH13P55290 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms