Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNA5SP184-201ENST00000411071 108 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 RPL7P8-201ENST00000411964 730 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 SSR1P2-201ENST00000415208 787 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 NUP35P1-201ENST00000422734 947 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGCS2P54868 GLRXP1-201ENST00000423261 334 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS2P54868 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGCS2P54868 RPL21P40-201ENST00000428586 483 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS2P54868 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGCS2P54868 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGCS2P54868 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS2P54868 ZNF886P-201ENST00000450781 723 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS2P54868 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGCS2P54868 AC020699.1-201ENST00000505161 445 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HMGCS2P54868 RNU1-143P-201ENST00000516296 146 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGCS2P54868 AC091515.1-201ENST00000548110 679 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS2P54868 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGCS2P54868 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGCS2P54868 AC015688.2-201ENST00000584523 262 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGCS2P54868 AP001542.2-201ENST00000593141 364 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AC116312.1-201ENST00000606841 314 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGCS2P54868 U1.23-201ENST00000610293 146 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 RNU1-68P-201ENST00000615382 146 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.43□□□□□ -1.86
HMGCS2P54868 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HMGCS2P54868 U1.39-201ENST00000621562 146 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AC006963.1-201ENST00000624003 1052 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGCS2P54868 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HMGCS2P54868 MFSD8-245ENST00000641743 948 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AL355578.1-201ENST00000607405 1328 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS2P54868 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS2P54868 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS2P54868 AC016716.1-201ENST00000265882 708 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 FTLP6-201ENST00000355274 422 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
HMGCS2P54868 RNU6-851P-201ENST00000384565 107 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 RNU6-906P-201ENST00000384700 70 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 SNORA40.2-201ENST00000390847 128 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCS2P54868 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS2P54868 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCS2P54868 USP9YP24-201ENST00000434374 697 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCS2P54868 ISCA1P2-201ENST00000438679 421 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 USP9YP17-201ENST00000444617 696 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 HMGB3P6-201ENST00000444896 598 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCS2P54868 AL590399.6-201ENST00000446396 307 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AL589880.1-201ENST00000448271 287 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 COX6CP18-201ENST00000448769 222 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AC233982.1-201ENST00000451247 436 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AL109933.2-201ENST00000452651 260 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCS2P54868 AC114967.1-201ENST00000504890 259 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCS2P54868 ARL2BPP6-201ENST00000512757 439 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 SNORA70.14-201ENST00000516205 110 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 RPL12P22-201ENST00000519073 490 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCS2P54868 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.42□□□□□ -1.86
HMGCS2P54868 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS2P54868 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCS2P54868 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.42□□□□□ -1.86
HMGCS2P54868 AC011602.1-201ENST00000546484 331 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCS2P54868 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCS2P54868 MTND3P13-201ENST00000574391 343 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AC015871.2-201ENST00000603605 948 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 MTND3P19-201ENST00000603825 345 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AC091488.1-201ENST00000604239 660 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AC006386.1-201ENST00000619436 415 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCS2P54868 AC087821.2-201ENST00000637086 450 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 MTND5P24-201ENST00000438892 1767 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.42□□□□□ -1.86
HMGCS2P54868 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HMGCS2P54868 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGCS2P54868 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCS2P54868 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCS2P54868 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGCS2P54868 MIR423-201ENST00000362201 94 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 SNORA31-201ENST00000362607 130 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 MIR217-201ENST00000384817 110 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AL136310.1-201ENST00000404926 654 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 RNU2-37P-201ENST00000410695 177 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AL592148.1-201ENST00000413568 445 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AL356320.2-201ENST00000417263 507 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 RPS3AP37-201ENST00000419176 745 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms