Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TRAV8-5-201ENST00000537369 341 ntBASIC4.38□□□□□ -1.71
NEK3P51956 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.38□□□□□ -1.71
NEK3P51956 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.38□□□□□ -1.71
NEK3P51956 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.38□□□□□ -1.71
NEK3P51956 MIR5697-201ENST00000578045 78 ntBASIC4.38□□□□□ -1.71
NEK3P51956 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.38□□□□□ -1.71
NEK3P51956 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEK3P51956 AC023043.4-201ENST00000612081 449 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AL450472.3-201ENST00000615578 367 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AC027807.2-201ENST00000616099 408 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AC108479.2-201ENST00000617314 601 ntBASIC4.38□□□□□ -1.71
NEK3P51956 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEK3P51956 AP003399.1-201ENST00000637534 361 ntBASIC4.38□□□□□ -1.71
NEK3P51956 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.38□□□□□ -1.71
NEK3P51956 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.38□□□□□ -1.71
NEK3P51956 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.38□□□□□ -1.71
NEK3P51956 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEK3P51956 AL513185.3-201ENST00000433335 1300 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AL158163.1-201ENST00000603915 1649 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.38□□□□□ -1.71
NEK3P51956 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEK3P51956 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NEK3P51956 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEK3P51956 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NEK3P51956 AC024560.2-201ENST00000507981 1497 ntBASIC4.37□□□□□ -1.71
NEK3P51956 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEK3P51956 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NEK3P51956 DDX10P1-201ENST00000448545 1933 ntBASIC4.37□□□□□ -1.71
NEK3P51956 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.37□□□□□ -1.71
NEK3P51956 FGF7P2-201ENST00000332473 296 ntBASIC4.37□□□□□ -1.71
NEK3P51956 MIR383-201ENST00000362257 73 ntBASIC4.37□□□□□ -1.71
NEK3P51956 RNA5SP502-201ENST00000362694 119 ntBASIC4.37□□□□□ -1.71
NEK3P51956 RNA5SP175-201ENST00000364275 119 ntBASIC4.37□□□□□ -1.71
NEK3P51956 RNU1-132P-201ENST00000364300 164 ntBASIC4.37□□□□□ -1.71
NEK3P51956 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NEK3P51956 RNY3P10-201ENST00000384764 102 ntBASIC4.37□□□□□ -1.71
NEK3P51956 RPS20P2-201ENST00000402520 389 ntBASIC4.37□□□□□ -1.71
NEK3P51956 Y_RNA.598-201ENST00000410480 95 ntBASIC4.37□□□□□ -1.71
NEK3P51956 Y_RNA.608-201ENST00000410647 95 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.37□□□□□ -1.71
NEK3P51956 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.37□□□□□ -1.71
NEK3P51956 RPL23AP38-201ENST00000423801 469 ntBASIC4.37□□□□□ -1.71
NEK3P51956 EIF1P3-201ENST00000423841 334 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.37□□□□□ -1.71
NEK3P51956 MTATP6P4-201ENST00000427725 675 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC079780.1-201ENST00000428259 207 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.37□□□□□ -1.71
NEK3P51956 USP9YP12-201ENST00000450481 570 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AL590365.1-201ENST00000450788 243 ntBASIC4.37□□□□□ -1.71
NEK3P51956 SNRPGP9-201ENST00000456025 225 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AL122001.1-201ENST00000457027 370 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC105137.1-201ENST00000484355 562 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC041039.1-201ENST00000485656 536 ntBASIC4.37□□□□□ -1.71
NEK3P51956 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.37□□□□□ -1.71
NEK3P51956 AC108475.1-201ENST00000507880 950 ntBASIC4.37□□□□□ -1.71
NEK3P51956 VWA8P1-201ENST00000510889 176 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC105914.1-201ENST00000511798 226 ntBASIC4.37□□□□□ -1.71
NEK3P51956 MRPL49P2-201ENST00000521066 465 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AP000907.2-201ENST00000530827 353 ntBASIC4.37□□□□□ -1.71
NEK3P51956 ZNF192P1-203ENST00000565888 810 ntBASIC4.37□□□□□ -1.71
NEK3P51956 RPL23AP87-202ENST00000573039 466 ntBASIC4.37□□□□□ -1.71
NEK3P51956 COX6CP3-201ENST00000580869 223 ntBASIC4.37□□□□□ -1.71
NEK3P51956 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.37□□□□□ -1.71
NEK3P51956 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.37□□□□□ -1.71
NEK3P51956 U73023.1-201ENST00000603134 700 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC020910.2-201ENST00000603635 610 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC135507.1-201ENST00000607214 561 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AL021997.2-201ENST00000615674 271 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.37□□□□□ -1.71
NEK3P51956 AL603758.1-201ENST00000618654 241 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC009878.1-201ENST00000621819 340 ntBASIC4.37□□□□□ -1.71
NEK3P51956 AC243312.2-201ENST00000623340 601 ntBASIC4.37□□□□□ -1.71
NEK3P51956 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.37□□□□□ -1.71
NEK3P51956 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.37□□□□□ -1.71
NEK3P51956 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NEK3P51956 AL672296.1-201ENST00000427780 2158 ntBASIC4.37□□□□□ -1.71
NEK3P51956 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEK3P51956 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEK3P51956 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NEK3P51956 AC021755.1-201ENST00000559747 1447 ntBASIC4.37□□□□□ -1.71
NEK3P51956 ZNF962P-201ENST00000443465 3140 ntBASIC4.37□□□□□ -1.71
NEK3P51956 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
NEK3P51956 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.36□□□□□ -1.71
NEK3P51956 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEK3P51956 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NEK3P51956 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEK3P51956 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NEK3P51956 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEK3P51956 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NEK3P51956 DEFB108F-201ENST00000344638 222 ntBASIC4.36□□□□□ -1.71
NEK3P51956 RNA5SP388-201ENST00000362584 119 ntBASIC4.36□□□□□ -1.71
NEK3P51956 RN7SKP227-201ENST00000364445 330 ntBASIC4.36□□□□□ -1.71
NEK3P51956 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEK3P51956 RNU6-432P-201ENST00000384196 109 ntBASIC4.36□□□□□ -1.71
NEK3P51956 SNORA70C-201ENST00000384538 135 ntBASIC4.36□□□□□ -1.71
NEK3P51956 RPL27AP8-201ENST00000424277 446 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.36□□□□□ -1.71
NEK3P51956 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.36□□□□□ -1.71
NEK3P51956 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms