Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 HSPA8P1-201ENST00000425843 1833 ntBASIC3.11□□□□□ -1.91
HCFC1P51610 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.11□□□□□ -1.91
HCFC1P51610 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 PRRC2CP1-201ENST00000404428 159 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AL139098.1-201ENST00000407291 389 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 RPL31P52-201ENST00000407532 367 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AMD1P2-201ENST00000412936 992 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC017079.2-201ENST00000416102 485 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC007529.1-201ENST00000418574 2178 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC098592.1-201ENST00000419352 333 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 RPL23AP82-202ENST00000427528 469 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 MED14P1-201ENST00000430517 648 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.1□□□□□ -1.91
HCFC1P51610 AL117351.1-201ENST00000438864 766 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC092427.1-201ENST00000439177 601 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 MTCO1P48-201ENST00000448024 1096 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 RPL39P6-201ENST00000448289 150 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 CENPBD1P1-201ENST00000464061 469 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 MTND4LP3-201ENST00000468320 276 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 NCOR1P1-202ENST00000486162 291 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 BTF3L4P4-201ENST00000506381 449 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 IGKV2D-23-201ENST00000518179 286 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 AC103843.2-201ENST00000530523 682 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC068587.4-201ENST00000533893 186 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.1□□□□□ -1.91
HCFC1P51610 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.1□□□□□ -1.91
HCFC1P51610 MIR4637-201ENST00000582405 84 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.1□□□□□ -1.91
HCFC1P51610 AL139286.1-201ENST00000604465 483 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 OR6R2P-201ENST00000609216 300 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 AL607023.1-201ENST00000620045 248 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 OR4G11P-202ENST00000642116 1414 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 MTCO1P23-201ENST00000415223 1526 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
HCFC1P51610 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 Y_RNA.436-201ENST00000384097 102 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 RPL23AP29-201ENST00000397284 453 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 Z99497.1-201ENST00000421282 135 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 RPL21P109-201ENST00000422213 475 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.1□□□□□ -1.91
HCFC1P51610 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 RPL12P26-201ENST00000452430 487 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 AP000893.1-201ENST00000474462 794 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 AC116347.2-201ENST00000514912 523 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 NARSP2-201ENST00000518524 679 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.1□□□□□ -1.91
HCFC1P51610 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 MIR5680-201ENST00000577577 84 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 MIR4716-201ENST00000579628 84 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 VN1R90P-201ENST00000595717 726 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.1□□□□□ -1.91
HCFC1P51610 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC1P51610 OR5BR1P-201ENST00000524992 1330 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HCFC1P51610 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HCFC1P51610 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC1P51610 CR383658.2-201ENST00000547576 1525 ntBASIC3.1□□□□□ -1.91
HCFC1P51610 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HCFC1P51610 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.09□□□□□ -1.91
HCFC1P51610 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HCFC1P51610 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HCFC1P51610 Y_RNA.111-201ENST00000363248 100 ntBASIC3.09□□□□□ -1.91
HCFC1P51610 RNU6-921P-201ENST00000384361 107 ntBASIC3.09□□□□□ -1.91
HCFC1P51610 SNORA48.5-201ENST00000391143 135 ntBASIC3.09□□□□□ -1.91
HCFC1P51610 U3.39-201ENST00000408569 239 ntBASIC3.09□□□□□ -1.91
HCFC1P51610 RNA5SP239-201ENST00000410218 129 ntBASIC3.09□□□□□ -1.91
HCFC1P51610 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.09□□□□□ -1.91
HCFC1P51610 MTCO2P34-201ENST00000421994 607 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms