Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.85□□□□□ -1.79
SOX2P48431 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.85□□□□□ -1.79
SOX2P48431 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.85□□□□□ -1.79
SOX2P48431 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX2P48431 AC012507.3-201ENST00000603556 477 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AC115621.1-201ENST00000604653 858 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AC104458.1-201ENST00000608243 463 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AC112204.3-201ENST00000623822 332 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AL159972.1-201ENST00000625150 448 ntBASIC3.85□□□□□ -1.79
SOX2P48431 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX2P48431 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 MTCO1P24-201ENST00000515438 1558 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AL356489.2-201ENST00000566968 3528 ntBASIC3.84□□□□□ -1.79
SOX2P48431 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.84□□□□□ -1.79
SOX2P48431 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.79
SOX2P48431 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SOX2P48431 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SOX2P48431 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX2P48431 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX2P48431 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 AC009951.1-201ENST00000623674 2614 ntBASIC3.84□□□□□ -1.79
SOX2P48431 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX2P48431 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SOX2P48431 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SOX2P48431 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX2P48431 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SOX2P48431 RNU6-1085P-201ENST00000363576 107 ntBASIC3.84□□□□□ -1.79
SOX2P48431 RNY4P14-201ENST00000363656 96 ntBASIC3.84□□□□□ -1.79
SOX2P48431 RNU4-1-201ENST00000363925 141 ntBASIC3.84□□□□□ -1.79
SOX2P48431 RHOT1P2-201ENST00000366423 333 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SOX2P48431 Y_RNA.409-201ENST00000383990 98 ntBASIC3.84□□□□□ -1.79
SOX2P48431 Y_RNA.548-201ENST00000384656 105 ntBASIC3.84□□□□□ -1.79
SOX2P48431 MIR659-201ENST00000384963 97 ntBASIC3.84□□□□□ -1.79
SOX2P48431 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SOX2P48431 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SOX2P48431 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.84□□□□□ -1.79
SOX2P48431 RNA5SP56-201ENST00000410277 118 ntBASIC3.84□□□□□ -1.79
SOX2P48431 RN7SKP100-201ENST00000411258 284 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AL160275.2-201ENST00000412010 394 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 MTCYBP24-201ENST00000420387 1106 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AC092832.1-201ENST00000422934 400 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX2P48431 AL049745.1-201ENST00000433953 286 ntBASIC3.84□□□□□ -1.79
SOX2P48431 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 RPL23AP33-201ENST00000442301 452 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 CEACAMP6-201ENST00000452007 574 ntBASIC3.84□□□□□ -1.79
SOX2P48431 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.84□□□□□ -1.79
SOX2P48431 RPL7AP6-201ENST00000477943 801 ntBASIC3.84□□□□□ -1.79
SOX2P48431 RN7SL629P-201ENST00000489622 285 ntBASIC3.84□□□□□ -1.79
SOX2P48431 IGLV2-34-201ENST00000490007 283 ntBASIC3.84□□□□□ -1.79
SOX2P48431 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AC079382.1-201ENST00000493346 557 ntBASIC3.84□□□□□ -1.79
SOX2P48431 RN7SL808P-201ENST00000496066 299 ntBASIC3.84□□□□□ -1.79
SOX2P48431 FAM92A1P2-202ENST00000504766 877 ntBASIC3.84□□□□□ -1.79
SOX2P48431 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 IGLV2-28-201ENST00000520681 304 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 AC135001.1-201ENST00000544546 283 ntBASIC3.84□□□□□ -1.79
SOX2P48431 HMGN2P6-201ENST00000551091 273 ntBASIC3.84□□□□□ -1.79
SOX2P48431 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.84□□□□□ -1.79
SOX2P48431 EDDM3DP-201ENST00000554692 434 ntBASIC3.84□□□□□ -1.79
SOX2P48431 SUB1P2-201ENST00000556401 297 ntBASIC3.84□□□□□ -1.79
SOX2P48431 MIR548S-201ENST00000581352 82 ntBASIC3.84□□□□□ -1.79
SOX2P48431 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX2P48431 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 KC877982.1-201ENST00000602313 470 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AC008638.3-201ENST00000603341 463 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AC112230.1-201ENST00000604342 547 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AC007363.1-201ENST00000604736 620 ntBASIC3.84□□□□□ -1.79
SOX2P48431 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 U73479.1-201ENST00000618062 168 ntBASIC3.84□□□□□ -1.79
SOX2P48431 AL008636.1-201ENST00000625038 1018 ntBASIC3.84□□□□□ -1.79
SOX2P48431 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SOX2P48431 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX2P48431 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
SOX2P48431 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
SOX2P48431 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SOX2P48431 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SOX2P48431 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
SOX2P48431 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SOX2P48431 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SOX2P48431 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms