Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HADHAP40939 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.88□□□□□ -1.79
HADHAP40939 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HADHAP40939 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HADHAP40939 AL136164.4-201ENST00000625013 2135 ntBASIC3.88□□□□□ -1.79
HADHAP40939 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HADHAP40939 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.87□□□□□ -1.79
HADHAP40939 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.87□□□□□ -1.79
HADHAP40939 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.87□□□□□ -1.79
HADHAP40939 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.87□□□□□ -1.79
HADHAP40939 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HADHAP40939 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.87□□□□□ -1.79
HADHAP40939 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
HADHAP40939 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HADHAP40939 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
HADHAP40939 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HADHAP40939 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HADHAP40939 Y_RNA.18-201ENST00000362461 102 ntBASIC3.87□□□□□ -1.79
HADHAP40939 Y_RNA.234-201ENST00000364409 97 ntBASIC3.87□□□□□ -1.79
HADHAP40939 RNU6-253P-201ENST00000384730 105 ntBASIC3.87□□□□□ -1.79
HADHAP40939 MIR320C1-201ENST00000408566 88 ntBASIC3.87□□□□□ -1.79
HADHAP40939 RHEBP3-201ENST00000411920 351 ntBASIC3.87□□□□□ -1.79
HADHAP40939 RPS15AP38-201ENST00000413110 372 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC007390.1-201ENST00000415722 356 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.87□□□□□ -1.79
HADHAP40939 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HADHAP40939 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.87□□□□□ -1.79
HADHAP40939 EEF1E1P1-201ENST00000446998 430 ntBASIC3.87□□□□□ -1.79
HADHAP40939 MTND1P9-201ENST00000453775 944 ntBASIC3.87□□□□□ -1.79
HADHAP40939 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.87□□□□□ -1.79
HADHAP40939 VN1R105P-201ENST00000486595 910 ntBASIC3.87□□□□□ -1.79
HADHAP40939 LINC00888-204ENST00000487386 421 ntBASIC3.87□□□□□ -1.79
HADHAP40939 RPS4XP15-201ENST00000489210 795 ntBASIC3.87□□□□□ -1.79
HADHAP40939 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.87□□□□□ -1.79
HADHAP40939 MLLT10P2-201ENST00000506434 249 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC004062.1-201ENST00000509926 645 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.87□□□□□ -1.79
HADHAP40939 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.87□□□□□ -1.79
HADHAP40939 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AP000926.4-201ENST00000527351 454 ntBASIC3.87□□□□□ -1.79
HADHAP40939 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HADHAP40939 OR5AP1P-201ENST00000529730 940 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AL158211.1-201ENST00000566763 763 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC034105.4-201ENST00000568304 277 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.87□□□□□ -1.79
HADHAP40939 AC006130.2-201ENST00000586202 326 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.87□□□□□ -1.79
HADHAP40939 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.87□□□□□ -1.79
HADHAP40939 AL137849.1-201ENST00000604767 169 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC072039.2-201ENST00000608883 439 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AL391261.4-201ENST00000616012 481 ntBASIC3.87□□□□□ -1.79
HADHAP40939 XIST_intron.1-201ENST00000619444 68 ntBASIC3.87□□□□□ -1.79
HADHAP40939 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC091905.1-201ENST00000624400 311 ntBASIC3.87□□□□□ -1.79
HADHAP40939 AC079416.3-201ENST00000624479 549 ntBASIC3.87□□□□□ -1.79
HADHAP40939 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.87□□□□□ -1.79
HADHAP40939 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HADHAP40939 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
HADHAP40939 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.87□□□□□ -1.79
HADHAP40939 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HADHAP40939 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HADHAP40939 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.86□□□□□ -1.79
HADHAP40939 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
HADHAP40939 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HADHAP40939 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HADHAP40939 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HADHAP40939 RPL21P132-201ENST00000331267 462 ntBASIC3.86□□□□□ -1.79
HADHAP40939 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.86□□□□□ -1.79
HADHAP40939 RNU6-213P-201ENST00000384051 104 ntBASIC3.86□□□□□ -1.79
HADHAP40939 U1.1-201ENST00000384101 164 ntBASIC3.86□□□□□ -1.79
HADHAP40939 RNU6-1200P-201ENST00000384162 107 ntBASIC3.86□□□□□ -1.79
HADHAP40939 HSPE1P8-201ENST00000406997 288 ntBASIC3.86□□□□□ -1.79
HADHAP40939 RN7SKP159-201ENST00000410657 292 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.86□□□□□ -1.79
HADHAP40939 AC107081.1-201ENST00000414975 361 ntBASIC3.86□□□□□ -1.79
HADHAP40939 CCDC58P2-201ENST00000417131 366 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.86□□□□□ -1.79
HADHAP40939 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.86□□□□□ -1.79
HADHAP40939 AC005005.2-201ENST00000420779 380 ntBASIC3.86□□□□□ -1.79
HADHAP40939 RPL21P109-201ENST00000422213 475 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AL365396.1-201ENST00000430854 671 ntBASIC3.86□□□□□ -1.79
HADHAP40939 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HADHAP40939 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.86□□□□□ -1.79
HADHAP40939 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.86□□□□□ -1.79
HADHAP40939 MTCO1P27-201ENST00000448269 226 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.86□□□□□ -1.79
HADHAP40939 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.86□□□□□ -1.79
HADHAP40939 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.86□□□□□ -1.79
HADHAP40939 SAP18P1-201ENST00000512058 390 ntBASIC3.86□□□□□ -1.79
HADHAP40939 RNA5SP468-201ENST00000516782 93 ntBASIC3.86□□□□□ -1.79
HADHAP40939 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.86□□□□□ -1.79
HADHAP40939 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.86□□□□□ -1.79
HADHAP40939 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.86□□□□□ -1.79
HADHAP40939 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.86□□□□□ -1.79
HADHAP40939 DUXAP6-201ENST00000553858 601 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.86□□□□□ -1.79
HADHAP40939 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.86□□□□□ -1.79
HADHAP40939 NIFKP6-201ENST00000598115 845 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AC021171.1-201ENST00000603137 706 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AC011468.4-201ENST00000603942 409 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms