Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.84□□□□□ -1.95
RFC3P40938 LARP7P3-201ENST00000579888 337 ntBASIC2.84□□□□□ -1.95
RFC3P40938 AL355810.1-201ENST00000614629 552 ntBASIC2.84□□□□□ -1.95
RFC3P40938 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.84□□□□□ -1.95
RFC3P40938 AC073348.1-201ENST00000623002 331 ntBASIC2.84□□□□□ -1.95
RFC3P40938 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.84□□□□□ -1.95
RFC3P40938 AC111188.2-201ENST00000529697 1387 ntBASIC2.84□□□□□ -1.96
RFC3P40938 MTCO1P4-201ENST00000520516 1409 ntBASIC2.84□□□□□ -1.96
RFC3P40938 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFC3P40938 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RFC3P40938 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFC3P40938 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RFC3P40938 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFC3P40938 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RFC3P40938 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RFC3P40938 OR5H2-201ENST00000355273 945 ntBASIC2.83□□□□□ -1.96
RFC3P40938 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RFC3P40938 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.83□□□□□ -1.96
RFC3P40938 OR1L1-202ENST00000373686 1083 ntBASIC2.83□□□□□ -1.96
RFC3P40938 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.83□□□□□ -1.96
RFC3P40938 SNORA54-201ENST00000384281 123 ntBASIC2.83□□□□□ -1.96
RFC3P40938 SNORA44-201ENST00000384584 132 ntBASIC2.83□□□□□ -1.96
RFC3P40938 SNORD15B-201ENST00000384714 146 ntBASIC2.83□□□□□ -1.96
RFC3P40938 TMSB4XP8-201ENST00000402089 135 ntBASIC2.83□□□□□ -1.96
RFC3P40938 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AL139098.1-201ENST00000407291 389 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AC109780.2-201ENST00000413467 845 ntBASIC2.83□□□□□ -1.96
RFC3P40938 TMSB4XP6-201ENST00000415187 135 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AC099677.1-201ENST00000420575 175 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.83□□□□□ -1.96
RFC3P40938 TMSB4XP1-201ENST00000424567 135 ntBASIC2.83□□□□□ -1.96
RFC3P40938 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.83□□□□□ -1.96
RFC3P40938 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.83□□□□□ -1.96
RFC3P40938 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.83□□□□□ -1.96
RFC3P40938 GXYLT1P1-201ENST00000446657 490 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AC140076.1-201ENST00000449897 361 ntBASIC2.83□□□□□ -1.96
RFC3P40938 RPL36AP33-201ENST00000450395 310 ntBASIC2.83□□□□□ -1.96
RFC3P40938 RNU7-140P-201ENST00000459546 60 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AC008379.1-201ENST00000463655 464 ntBASIC2.83□□□□□ -1.96
RFC3P40938 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.83□□□□□ -1.96
RFC3P40938 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.83□□□□□ -1.96
RFC3P40938 HMGN2P13-201ENST00000476476 274 ntBASIC2.83□□□□□ -1.96
RFC3P40938 RN7SL499P-201ENST00000481141 276 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AC048346.1-201ENST00000510247 144 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RFC3P40938 AP002404.1-201ENST00000532005 451 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AC055876.1-202ENST00000567053 138 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.83□□□□□ -1.96
RFC3P40938 AC010653.1-201ENST00000571108 881 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AL627309.6-201ENST00000606857 840 ntBASIC2.83□□□□□ -1.96
RFC3P40938 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFC3P40938 AC009318.4-201ENST00000620496 486 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AL121594.5-201ENST00000631724 573 ntBASIC2.83□□□□□ -1.96
RFC3P40938 AC091948.2-201ENST00000636510 279 ntBASIC2.83□□□□□ -1.96
RFC3P40938 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.83□□□□□ -1.96
RFC3P40938 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
RFC3P40938 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.83□□□□□ -1.96
RFC3P40938 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFC3P40938 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
RFC3P40938 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.82□□□□□ -1.96
RFC3P40938 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.82□□□□□ -1.96
RFC3P40938 Y_RNA.111-201ENST00000363248 100 ntBASIC2.82□□□□□ -1.96
RFC3P40938 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.82□□□□□ -1.96
RFC3P40938 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.82□□□□□ -1.96
RFC3P40938 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RFC3P40938 RNU6-549P-201ENST00000384433 107 ntBASIC2.82□□□□□ -1.96
RFC3P40938 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.82□□□□□ -1.96
RFC3P40938 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.82□□□□□ -1.96
RFC3P40938 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.82□□□□□ -1.96
RFC3P40938 AC233728.2-201ENST00000425348 757 ntBASIC2.82□□□□□ -1.96
RFC3P40938 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RFC3P40938 AL390023.1-201ENST00000428836 262 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AC234064.1-201ENST00000436312 247 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.82□□□□□ -1.96
RFC3P40938 COX6CP2-201ENST00000444980 225 ntBASIC2.82□□□□□ -1.96
RFC3P40938 Z99127.3-201ENST00000448158 395 ntBASIC2.82□□□□□ -1.96
RFC3P40938 MTND2P19-201ENST00000449129 1012 ntBASIC2.82□□□□□ -1.96
RFC3P40938 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.82□□□□□ -1.96
RFC3P40938 NDUFA5P7-201ENST00000452914 242 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.82□□□□□ -1.96
RFC3P40938 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.82□□□□□ -1.96
RFC3P40938 RPS23P3-201ENST00000470993 430 ntBASIC2.82□□□□□ -1.96
RFC3P40938 RPS3AP14-201ENST00000483907 780 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AC096576.1-201ENST00000489014 359 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AC109471.1-201ENST00000511631 612 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AC027338.1-201ENST00000514840 825 ntBASIC2.82□□□□□ -1.96
RFC3P40938 RNA5SP135-201ENST00000517019 125 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.82□□□□□ -1.96
RFC3P40938 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.82□□□□□ -1.96
RFC3P40938 AC113192.3-201ENST00000529152 742 ntBASIC2.82□□□□□ -1.96
RFC3P40938 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RFC3P40938 AC018630.1-201ENST00000541376 925 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AC126177.3-201ENST00000551839 688 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.82□□□□□ -1.96
RFC3P40938 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
RFC3P40938 AC006116.7-201ENST00000590141 756 ntBASIC2.82□□□□□ -1.96
RFC3P40938 BDH2P1-201ENST00000602288 736 ntBASIC2.82□□□□□ -1.96
RFC3P40938 GAS5-AS1-201ENST00000602767 694 ntBASIC2.82□□□□□ -1.96
RFC3P40938 BNIP3P11-201ENST00000603878 563 ntBASIC2.82□□□□□ -1.96
RFC3P40938 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms