Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.06□□□□□ -1.92
CPS1P31327 YWHAEP7-203ENST00000622054 312 ntBASIC3.06□□□□□ -1.92
CPS1P31327 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CPS1P31327 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CPS1P31327 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CPS1P31327 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.05□□□□□ -1.92
CPS1P31327 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.05□□□□□ -1.92
CPS1P31327 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CPS1P31327 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.05□□□□□ -1.92
CPS1P31327 AC023043.3-201ENST00000593113 385 ntBASIC3.05□□□□□ -1.92
CPS1P31327 AC073348.1-201ENST00000623002 331 ntBASIC3.05□□□□□ -1.92
CPS1P31327 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CPS1P31327 AC067852.7-201ENST00000623270 535 ntBASIC3.05□□□□□ -1.92
CPS1P31327 AL450326.2-201ENST00000421913 1962 ntBASIC3.05□□□□□ -1.92
CPS1P31327 AC093775.1-201ENST00000624154 1868 ntBASIC3.05□□□□□ -1.92
CPS1P31327 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.05□□□□□ -1.92
CPS1P31327 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.04□□□□□ -1.92
CPS1P31327 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.04□□□□□ -1.92
CPS1P31327 U8.10-201ENST00000384260 133 ntBASIC3.04□□□□□ -1.92
CPS1P31327 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CPS1P31327 SNORA79B-201ENST00000410557 148 ntBASIC3.04□□□□□ -1.92
CPS1P31327 RPL36AP6-201ENST00000435770 321 ntBASIC3.04□□□□□ -1.92
CPS1P31327 SNORD13-201ENST00000459299 104 ntBASIC3.04□□□□□ -1.92
CPS1P31327 OR52A4P-203ENST00000498233 1014 ntBASIC3.04□□□□□ -1.92
CPS1P31327 AC026412.2-201ENST00000512270 1075 ntBASIC3.04□□□□□ -1.92
CPS1P31327 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.04□□□□□ -1.92
CPS1P31327 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.04□□□□□ -1.92
CPS1P31327 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.04□□□□□ -1.92
CPS1P31327 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CPS1P31327 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.04□□□□□ -1.92
CPS1P31327 RNU6-661P-201ENST00000362409 107 ntBASIC3.03□□□□□ -1.92
CPS1P31327 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.03□□□□□ -1.92
CPS1P31327 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.03□□□□□ -1.92
CPS1P31327 RPS15AP12-201ENST00000419498 388 ntBASIC3.03□□□□□ -1.92
CPS1P31327 AC092473.1-201ENST00000441098 221 ntBASIC3.03□□□□□ -1.92
CPS1P31327 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.03□□□□□ -1.92
CPS1P31327 RNA5SP480-201ENST00000516840 109 ntBASIC3.03□□□□□ -1.92
CPS1P31327 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.03□□□□□ -1.92
CPS1P31327 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.03□□□□□ -1.92
CPS1P31327 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.03□□□□□ -1.92
CPS1P31327 AC091834.1-201ENST00000614543 472 ntBASIC3.03□□□□□ -1.92
CPS1P31327 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CPS1P31327 AP001486.2-201ENST00000561652 5113 ntBASIC3.03□□□□□ -1.92
CPS1P31327 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CPS1P31327 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CPS1P31327 AL161431.1-201ENST00000618966 4205 ntBASIC3.03□□□□□ -1.92
CPS1P31327 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.03□□□□□ -1.92
CPS1P31327 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.03□□□□□ -1.92
CPS1P31327 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CPS1P31327 AC017007.3-201ENST00000479865 435 ntBASIC3.03□□□□□ -1.92
CPS1P31327 AC055855.1-201ENST00000489563 579 ntBASIC3.03□□□□□ -1.92
CPS1P31327 AC007536.1-201ENST00000533382 349 ntBASIC3.03□□□□□ -1.92
CPS1P31327 AC011611.5-201ENST00000552477 578 ntBASIC3.03□□□□□ -1.92
CPS1P31327 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.03□□□□□ -1.92
CPS1P31327 AL160237.3-201ENST00000604114 1013 ntBASIC3.03□□□□□ -1.92
CPS1P31327 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
CPS1P31327 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CPS1P31327 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CPS1P31327 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.02□□□□□ -1.93
CPS1P31327 AP000275.1-201ENST00000411943 390 ntBASIC3.02□□□□□ -1.93
CPS1P31327 AP1B1P2-201ENST00000416196 106 ntBASIC3.02□□□□□ -1.93
CPS1P31327 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.02□□□□□ -1.93
CPS1P31327 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.02□□□□□ -1.93
CPS1P31327 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.02□□□□□ -1.93
CPS1P31327 RPP40P2-201ENST00000603596 712 ntBASIC3.02□□□□□ -1.93
CPS1P31327 AC090897.3-201ENST00000636973 1157 ntBASIC3.02□□□□□ -1.93
CPS1P31327 AC027514.1-201ENST00000588561 1603 ntBASIC3.02□□□□□ -1.93
CPS1P31327 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.02□□□□□ -1.93
CPS1P31327 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.01□□□□□ -1.93
CPS1P31327 Y_RNA.224-201ENST00000364308 111 ntBASIC3.01□□□□□ -1.93
CPS1P31327 RNU1-51P-201ENST00000365345 176 ntBASIC3.01□□□□□ -1.93
CPS1P31327 U8.8-201ENST00000365399 135 ntBASIC3.01□□□□□ -1.93
CPS1P31327 RPL7P53-201ENST00000421245 739 ntBASIC3.01□□□□□ -1.93
CPS1P31327 AC140059.1-201ENST00000489238 361 ntBASIC3.01□□□□□ -1.93
CPS1P31327 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.01□□□□□ -1.93
CPS1P31327 SUB1P3-201ENST00000564581 315 ntBASIC3.01□□□□□ -1.93
CPS1P31327 RN7SL622P-201ENST00000585292 275 ntBASIC3.01□□□□□ -1.93
CPS1P31327 AL451074.6-201ENST00000608512 729 ntBASIC3.01□□□□□ -1.93
CPS1P31327 VN1R7P-201ENST00000619242 903 ntBASIC3.01□□□□□ -1.93
CPS1P31327 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.01□□□□□ -1.93
CPS1P31327 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CPS1P31327 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
CPS1P31327 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.01□□□□□ -1.93
CPS1P31327 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CPS1P31327 SNORA25.6-201ENST00000364121 118 ntBASIC3□□□□□ -1.93
CPS1P31327 SNORA62.2-201ENST00000364672 152 ntBASIC3□□□□□ -1.93
CPS1P31327 SNORD6-201ENST00000365444 73 ntBASIC3□□□□□ -1.93
CPS1P31327 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3□□□□□ -1.93
CPS1P31327 EI24P1-201ENST00000416584 867 ntBASIC3□□□□□ -1.93
CPS1P31327 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3□□□□□ -1.93
CPS1P31327 NDUFB4P9-201ENST00000511646 388 ntBASIC3□□□□□ -1.93
CPS1P31327 AL356280.1-201ENST00000603614 379 ntBASIC3□□□□□ -1.93
CPS1P31327 RNU6-84P-201ENST00000607737 102 ntBASIC3□□□□□ -1.93
CPS1P31327 SNORA48.3-201ENST00000391081 134 ntBASIC2.99□□□□□ -1.93
CPS1P31327 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.99□□□□□ -1.93
CPS1P31327 RWDD4P2-201ENST00000426392 563 ntBASIC2.99□□□□□ -1.93
CPS1P31327 MTCO3P21-201ENST00000430791 643 ntBASIC2.99□□□□□ -1.93
CPS1P31327 MOB1AP2-201ENST00000446060 614 ntBASIC2.99□□□□□ -1.93
CPS1P31327 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.99□□□□□ -1.93
CPS1P31327 RWDD4P1-201ENST00000488019 565 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms