Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC009570.1-201ENST00000609599 745 ntBASIC6.01□□□□□ -1.45
RFX1P22670 MIR6820-201ENST00000611508 62 ntBASIC6.01□□□□□ -1.45
RFX1P22670 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.01□□□□□ -1.45
RFX1P22670 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFX1P22670 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.01□□□□□ -1.45
RFX1P22670 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.01□□□□□ -1.45
RFX1P22670 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RFX1P22670 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.01□□□□□ -1.45
RFX1P22670 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RFX1P22670 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.01□□□□□ -1.45
RFX1P22670 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RFX1P22670 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFX1P22670 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.01□□□□□ -1.45
RFX1P22670 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RFX1P22670 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RFX1P22670 SAMMSON-210ENST00000641260 1308 ntBASIC6□□□□□ -1.45
RFX1P22670 AC092747.4-201ENST00000620519 1861 ntBASIC6□□□□□ -1.45
RFX1P22670 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
RFX1P22670 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFX1P22670 AC090337.1-201ENST00000579651 2074 ntBASIC6□□□□□ -1.45
RFX1P22670 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFX1P22670 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6□□□□□ -1.45
RFX1P22670 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFX1P22670 RNA5SP131-201ENST00000365452 119 ntBASIC6□□□□□ -1.45
RFX1P22670 SNORD56.6-201ENST00000384569 71 ntBASIC6□□□□□ -1.45
RFX1P22670 NDUFS5P1-201ENST00000405668 289 ntBASIC6□□□□□ -1.45
RFX1P22670 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6□□□□□ -1.45
RFX1P22670 RNU2-43P-201ENST00000410306 190 ntBASIC6□□□□□ -1.45
RFX1P22670 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6□□□□□ -1.45
RFX1P22670 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6□□□□□ -1.45
RFX1P22670 NDUFB4P8-201ENST00000435351 367 ntBASIC6□□□□□ -1.45
RFX1P22670 FABP5P14-201ENST00000437273 393 ntBASIC6□□□□□ -1.45
RFX1P22670 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6□□□□□ -1.45
RFX1P22670 CEACAMP7-201ENST00000444105 496 ntBASIC6□□□□□ -1.45
RFX1P22670 PTMAP3-201ENST00000447474 330 ntBASIC6□□□□□ -1.45
RFX1P22670 AC009963.2-201ENST00000453431 138 ntBASIC6□□□□□ -1.45
RFX1P22670 AC005532.2-201ENST00000467154 373 ntBASIC6□□□□□ -1.45
RFX1P22670 RN7SL583P-201ENST00000475692 287 ntBASIC6□□□□□ -1.45
RFX1P22670 RPSAP50-201ENST00000481955 852 ntBASIC6□□□□□ -1.45
RFX1P22670 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6□□□□□ -1.45
RFX1P22670 RNU6-352P-201ENST00000516908 107 ntBASIC6□□□□□ -1.45
RFX1P22670 AC135001.1-201ENST00000544546 283 ntBASIC6□□□□□ -1.45
RFX1P22670 MTCO3P23-201ENST00000561363 289 ntBASIC6□□□□□ -1.45
RFX1P22670 AC007151.1-201ENST00000572774 483 ntBASIC6□□□□□ -1.45
RFX1P22670 AC006270.2-201ENST00000578523 652 ntBASIC6□□□□□ -1.45
RFX1P22670 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6□□□□□ -1.45
RFX1P22670 AC010680.4-201ENST00000605334 543 ntBASIC6□□□□□ -1.45
RFX1P22670 AC025574.2-201ENST00000615621 514 ntBASIC6□□□□□ -1.45
RFX1P22670 AL445363.3-201ENST00000623080 671 ntBASIC6□□□□□ -1.45
RFX1P22670 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFX1P22670 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFX1P22670 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFX1P22670 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6□□□□□ -1.45
RFX1P22670 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6□□□□□ -1.45
RFX1P22670 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFX1P22670 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
RFX1P22670 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFX1P22670 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RFX1P22670 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFX1P22670 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RFX1P22670 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.99□□□□□ -1.45
RFX1P22670 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFX1P22670 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
RFX1P22670 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFX1P22670 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.99□□□□□ -1.45
RFX1P22670 Y_RNA.187-201ENST00000363918 113 ntBASIC5.99□□□□□ -1.45
RFX1P22670 RNU6-701P-201ENST00000384059 107 ntBASIC5.99□□□□□ -1.45
RFX1P22670 Y_RNA.445-201ENST00000384168 102 ntBASIC5.99□□□□□ -1.45
RFX1P22670 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RFX1P22670 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
RFX1P22670 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFX1P22670 AC092017.2-201ENST00000427600 362 ntBASIC5.99□□□□□ -1.45
RFX1P22670 CKS1BP5-201ENST00000434172 273 ntBASIC5.99□□□□□ -1.45
RFX1P22670 AC005019.1-201ENST00000436455 431 ntBASIC5.99□□□□□ -1.45
RFX1P22670 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.99□□□□□ -1.45
RFX1P22670 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.99□□□□□ -1.45
RFX1P22670 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.99□□□□□ -1.45
RFX1P22670 RN7SL860P-201ENST00000473738 223 ntBASIC5.99□□□□□ -1.45
RFX1P22670 AP000797.2-201ENST00000475768 606 ntBASIC5.99□□□□□ -1.45
RFX1P22670 RPS4XP1-201ENST00000482189 787 ntBASIC5.99□□□□□ -1.45
RFX1P22670 AC106872.2-201ENST00000494303 480 ntBASIC5.99□□□□□ -1.45
RFX1P22670 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.99□□□□□ -1.45
RFX1P22670 AC091912.1-201ENST00000511351 248 ntBASIC5.99□□□□□ -1.45
RFX1P22670 RN7SKP24-201ENST00000515888 284 ntBASIC5.99□□□□□ -1.45
RFX1P22670 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.99□□□□□ -1.45
RFX1P22670 AP006587.4-201ENST00000526053 529 ntBASIC5.99□□□□□ -1.45
RFX1P22670 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFX1P22670 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.99□□□□□ -1.45
RFX1P22670 AC106782.4-201ENST00000568264 210 ntBASIC5.99□□□□□ -1.45
RFX1P22670 MIR4790-201ENST00000577799 79 ntBASIC5.99□□□□□ -1.45
RFX1P22670 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.99□□□□□ -1.45
RFX1P22670 AC104763.2-201ENST00000604179 382 ntBASIC5.99□□□□□ -1.45
RFX1P22670 AC010632.3-201ENST00000611377 369 ntBASIC5.99□□□□□ -1.45
RFX1P22670 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.99□□□□□ -1.45
RFX1P22670 AC008013.2-202ENST00000637965 364 ntBASIC5.99□□□□□ -1.45
RFX1P22670 AL049555.1-201ENST00000562834 1933 ntBASIC5.99□□□□□ -1.45
RFX1P22670 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFX1P22670 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFX1P22670 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFX1P22670 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms