Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 RN7SKP267-201ENST00000410381 285 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 RN7SKP106-201ENST00000410832 272 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 AL160275.2-201ENST00000412010 394 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 SSXP9-201ENST00000417503 292 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 BX510359.2-201ENST00000417920 305 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 MTCO2P19-201ENST00000427513 598 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.29□□□□□ -1.56
ATP2B1P20020 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.29□□□□□ -1.56
ATP2B1P20020 AC104651.2-201ENST00000447549 528 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATP2B1P20020 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.29□□□□□ -1.56
ATP2B1P20020 RPL36AP13-201ENST00000457490 317 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 RPL12P20-201ENST00000475538 479 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 RPS15AP36-201ENST00000492022 382 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.29□□□□□ -1.56
ATP2B1P20020 RNU6-1178P-201ENST00000516674 107 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 RNU6-1220P-201ENST00000517126 108 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 AL110118.1-201ENST00000553543 400 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.29□□□□□ -1.56
ATP2B1P20020 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.29□□□□□ -1.56
ATP2B1P20020 SNRPGP15-201ENST00000600149 222 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.29□□□□□ -1.56
ATP2B1P20020 AL391646.1-201ENST00000603860 190 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.29□□□□□ -1.56
ATP2B1P20020 AC067931.1-201ENST00000624190 671 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 AL136313.1-201ENST00000624804 202 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 AL133243.3-201ENST00000617415 3004 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATP2B1P20020 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATP2B1P20020 AC108467.2-201ENST00000617640 1597 ntBASIC5.29□□□□□ -1.56
ATP2B1P20020 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATP2B1P20020 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP2B1P20020 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.28□□□□□ -1.56
ATP2B1P20020 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ATP2B1P20020 AC108751.5-201ENST00000492880 1336 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.28□□□□□ -1.56
ATP2B1P20020 SCN1A-220ENST00000641603 12506 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.28□□□□□ -1.56
ATP2B1P20020 U3.11-201ENST00000364476 212 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 Y_RNA.248-201ENST00000364501 109 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 RNU6-335P-201ENST00000364563 113 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 RNA5SP235-201ENST00000365411 114 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ATP2B1P20020 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ATP2B1P20020 Y_RNA.409-201ENST00000383990 98 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 RNU6-1074P-201ENST00000383995 104 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 RNU6-629P-201ENST00000384061 103 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 SNORD115-47-201ENST00000391226 86 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 CIR1P3-201ENST00000405137 479 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 RN7SKP159-201ENST00000410657 292 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.28□□□□□ -1.56
ATP2B1P20020 GPR143P-201ENST00000434155 205 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.28□□□□□ -1.56
ATP2B1P20020 NPM1P49-201ENST00000448027 714 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.28□□□□□ -1.56
ATP2B1P20020 AL121769.1-201ENST00000469473 401 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 RPL36AP41-201ENST00000493820 306 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AC025164.1-201ENST00000496249 478 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATP2B1P20020 STMN1P2-201ENST00000508435 439 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.28□□□□□ -1.56
ATP2B1P20020 ARL2BPP6-201ENST00000512757 439 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 RNU6-64P-201ENST00000517119 105 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.28□□□□□ -1.56
ATP2B1P20020 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.28□□□□□ -1.56
ATP2B1P20020 AC090572.1-201ENST00000519251 160 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AP003072.2-201ENST00000527756 676 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.28□□□□□ -1.56
ATP2B1P20020 AP003034.1-201ENST00000534621 422 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.28□□□□□ -1.56
ATP2B1P20020 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.28□□□□□ -1.56
ATP2B1P20020 AC209154.1-201ENST00000582156 337 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.28□□□□□ -1.56
ATP2B1P20020 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.28□□□□□ -1.56
ATP2B1P20020 RPL26P30-202ENST00000602923 645 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AC103710.2-201ENST00000609912 942 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AC017083.3-201ENST00000609955 700 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AL450472.3-201ENST00000615578 367 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 AC009161.2-201ENST00000624626 138 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 U3.53-201ENST00000628922 216 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP2B1P20020 AC018529.3-201ENST00000624212 2254 ntBASIC5.28□□□□□ -1.56
ATP2B1P20020 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.28□□□□□ -1.56
ATP2B1P20020 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ATP2B1P20020 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATP2B1P20020 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.28□□□□□ -1.56
ATP2B1P20020 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP2B1P20020 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP2B1P20020 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
ATP2B1P20020 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATP2B1P20020 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ATP2B1P20020 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATP2B1P20020 SNORD56.2-201ENST00000363242 71 ntBASIC5.27□□□□□ -1.57
ATP2B1P20020 RNU6-1097P-201ENST00000363586 107 ntBASIC5.27□□□□□ -1.57
ATP2B1P20020 MIR298-201ENST00000401212 88 ntBASIC5.27□□□□□ -1.57
ATP2B1P20020 RNA5SP107-201ENST00000411358 122 ntBASIC5.27□□□□□ -1.57
ATP2B1P20020 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.27□□□□□ -1.57
ATP2B1P20020 UBE2FP1-201ENST00000416536 447 ntBASIC5.27□□□□□ -1.57
ATP2B1P20020 UQCRBP1-201ENST00000421129 336 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms