Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL4A2P08572 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.33□□□□□ -2.04
COL4A2P08572 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
COL4A2P08572 AC083799.1-201ENST00000366451 910 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 DEFA7P-201ENST00000382676 285 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 MIR142-201ENST00000384835 87 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 ATP5F1P6-201ENST00000402768 767 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 AL139156.1-201ENST00000412785 841 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 HMGB1P11-201ENST00000413899 637 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.33□□□□□ -2.04
COL4A2P08572 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.33□□□□□ -2.04
COL4A2P08572 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.33□□□□□ -2.04
COL4A2P08572 RSL24D1P2-201ENST00000445584 366 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.33□□□□□ -2.04
COL4A2P08572 HMGN2P23-201ENST00000456759 269 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.33□□□□□ -2.04
COL4A2P08572 MTATP6P22-201ENST00000507369 598 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.33□□□□□ -2.04
COL4A2P08572 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.33□□□□□ -2.04
COL4A2P08572 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.33□□□□□ -2.04
COL4A2P08572 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.33□□□□□ -2.04
COL4A2P08572 AC026464.5-201ENST00000562497 722 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.33□□□□□ -2.04
COL4A2P08572 MTATP6P25-201ENST00000574491 261 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.33□□□□□ -2.04
COL4A2P08572 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.33□□□□□ -2.04
COL4A2P08572 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.33□□□□□ -2.04
COL4A2P08572 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL4A2P08572 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
COL4A2P08572 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.32□□□□□ -2.04
COL4A2P08572 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL4A2P08572 Z86062.1-201ENST00000406773 777 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.32□□□□□ -2.04
COL4A2P08572 AC010881.1-201ENST00000433830 235 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL4A2P08572 AP000705.1-201ENST00000454567 350 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A2P08572 AP001086.1-201ENST00000494882 321 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.32□□□□□ -2.04
COL4A2P08572 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.32□□□□□ -2.04
COL4A2P08572 RNU6-751P-201ENST00000516382 101 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 AP001521.1-201ENST00000609150 300 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 RNF6P1-201ENST00000444889 1784 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 MTND4P31-201ENST00000425607 1343 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A2P08572 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL4A2P08572 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
COL4A2P08572 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
COL4A2P08572 ZNF72P-201ENST00000425869 1908 ntBASIC2.32□□□□□ -2.04
COL4A2P08572 RNU6-185P-201ENST00000384421 107 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 RNU6-482P-201ENST00000391068 107 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 RPS4XP6-201ENST00000477670 797 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AP000926.1-201ENST00000479573 241 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.31□□□□□ -2.04
COL4A2P08572 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A2P08572 HMGB1P46-201ENST00000520062 610 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.31□□□□□ -2.04
COL4A2P08572 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.31□□□□□ -2.04
COL4A2P08572 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A2P08572 SNRPGP18-201ENST00000553000 214 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AC084757.1-201ENST00000559987 490 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A2P08572 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.31□□□□□ -2.04
COL4A2P08572 AC010680.4-201ENST00000605334 543 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A2P08572 AC103710.3-201ENST00000608157 948 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AC067852.7-201ENST00000623270 535 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.31□□□□□ -2.04
COL4A2P08572 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A2P08572 CCNB2P1-201ENST00000399411 1150 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AC244453.4-201ENST00000419150 388 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 HMGB1P26-201ENST00000452520 628 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 RPL23AP62-201ENST00000463396 453 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 XKRY-201ENST00000510392 1100 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 RN7SKP244-201ENST00000516513 307 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AC019227.1-201ENST00000526902 510 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 OR5BN1P-201ENST00000532955 829 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AC025281.1-201ENST00000567026 265 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A2P08572 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 AC010297.1-201ENST00000623948 149 ntBASIC2.31□□□□□ -2.04
COL4A2P08572 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
COL4A2P08572 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
COL4A2P08572 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A2P08572 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A2P08572 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A2P08572 AC002543.1-201ENST00000299783 1954 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A2P08572 SNORA62.2-201ENST00000364672 152 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A2P08572 RNU6-452P-201ENST00000384406 107 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 U8.13-201ENST00000390842 128 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 AC107081.1-201ENST00000414975 361 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.3□□□□□ -2.04
COL4A2P08572 YWHAZP7-201ENST00000436906 631 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.3□□□□□ -2.04
COL4A2P08572 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.3□□□□□ -2.04
COL4A2P08572 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms