Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP3P08254 RPS6P12-201ENST00000432491 726 ntBASIC4.08□□□□□ -1.76
MMP3P08254 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP3P08254 AL831737.1-201ENST00000441288 271 ntBASIC4.08□□□□□ -1.76
MMP3P08254 RPS26P56-201ENST00000444468 240 ntBASIC4.08□□□□□ -1.76
MMP3P08254 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP3P08254 AC007967.1-201ENST00000455422 1159 ntBASIC4.08□□□□□ -1.76
MMP3P08254 RNU6-956P-201ENST00000458868 103 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC008155.2-201ENST00000464337 397 ntBASIC4.08□□□□□ -1.76
MMP3P08254 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP3P08254 S100A11P1-201ENST00000477525 312 ntBASIC4.08□□□□□ -1.76
MMP3P08254 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
MMP3P08254 KLRA1P-201ENST00000503499 986 ntBASIC4.08□□□□□ -1.76
MMP3P08254 HSPD1P15-201ENST00000505573 1122 ntBASIC4.08□□□□□ -1.76
MMP3P08254 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP3P08254 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP3P08254 MTND3P5-201ENST00000512798 333 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.08□□□□□ -1.76
MMP3P08254 AC016065.2-201ENST00000514530 444 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC104986.1-201ENST00000517978 436 ntBASIC4.08□□□□□ -1.76
MMP3P08254 OR4A45P-201ENST00000529954 901 ntBASIC4.08□□□□□ -1.76
MMP3P08254 ZNF705CP-201ENST00000530515 889 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC103843.2-201ENST00000530523 682 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.08□□□□□ -1.76
MMP3P08254 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP3P08254 LSM6P2-201ENST00000552208 177 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.08□□□□□ -1.76
MMP3P08254 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.08□□□□□ -1.76
MMP3P08254 MIR4716-201ENST00000579628 84 ntBASIC4.08□□□□□ -1.76
MMP3P08254 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 MIR3611-201ENST00000584484 83 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP3P08254 AC128687.1-201ENST00000605304 619 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP3P08254 AL139286.2-201ENST00000606838 396 ntBASIC4.08□□□□□ -1.76
MMP3P08254 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP3P08254 AC122108.2-201ENST00000611946 526 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC009878.1-201ENST00000621819 340 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC000123.2-201ENST00000623124 461 ntBASIC4.08□□□□□ -1.76
MMP3P08254 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.08□□□□□ -1.76
MMP3P08254 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP3P08254 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
MMP3P08254 AL079343.1-201ENST00000572358 1771 ntBASIC4.07□□□□□ -1.76
MMP3P08254 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP3P08254 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
MMP3P08254 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP3P08254 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP3P08254 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP3P08254 OR4G11P-202ENST00000642116 1414 ntBASIC4.07□□□□□ -1.76
MMP3P08254 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP3P08254 RNA5SP50-201ENST00000363731 107 ntBASIC4.07□□□□□ -1.76
MMP3P08254 RNU6-289P-201ENST00000364093 107 ntBASIC4.07□□□□□ -1.76
MMP3P08254 RNA5SP267-201ENST00000364893 126 ntBASIC4.07□□□□□ -1.76
MMP3P08254 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP3P08254 OR5H15-201ENST00000383696 930 ntBASIC4.07□□□□□ -1.76
MMP3P08254 SNORA51.6-201ENST00000384151 125 ntBASIC4.07□□□□□ -1.76
MMP3P08254 RN7SKP177-201ENST00000410567 355 ntBASIC4.07□□□□□ -1.76
MMP3P08254 Z92545.1-201ENST00000411782 234 ntBASIC4.07□□□□□ -1.76
MMP3P08254 HMGB1P11-201ENST00000413899 637 ntBASIC4.07□□□□□ -1.76
MMP3P08254 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP3P08254 RPS15AP40-201ENST00000419621 391 ntBASIC4.07□□□□□ -1.76
MMP3P08254 AL138785.1-201ENST00000425821 331 ntBASIC4.07□□□□□ -1.76
MMP3P08254 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
MMP3P08254 AC087650.1-201ENST00000431445 468 ntBASIC4.07□□□□□ -1.76
MMP3P08254 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.07□□□□□ -1.76
MMP3P08254 ELOCP18-201ENST00000434209 337 ntBASIC4.07□□□□□ -1.76
MMP3P08254 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP3P08254 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP3P08254 AL512286.1-201ENST00000439244 400 ntBASIC4.07□□□□□ -1.76
MMP3P08254 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP3P08254 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP3P08254 COX6CP12-201ENST00000446748 202 ntBASIC4.07□□□□□ -1.76
MMP3P08254 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP3P08254 AC104073.1-201ENST00000451988 151 ntBASIC4.07□□□□□ -1.76
MMP3P08254 RNU7-136P-201ENST00000458819 69 ntBASIC4.07□□□□□ -1.76
MMP3P08254 RPS4XP10-201ENST00000465034 731 ntBASIC4.07□□□□□ -1.76
MMP3P08254 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP3P08254 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.07□□□□□ -1.76
MMP3P08254 AC107016.1-201ENST00000550463 337 ntBASIC4.07□□□□□ -1.76
MMP3P08254 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP3P08254 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.07□□□□□ -1.76
MMP3P08254 AGGF1P4-201ENST00000568249 801 ntBASIC4.07□□□□□ -1.76
MMP3P08254 MIR4637-201ENST00000582405 84 ntBASIC4.07□□□□□ -1.76
MMP3P08254 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP3P08254 AC025165.5-201ENST00000602802 578 ntBASIC4.07□□□□□ -1.76
MMP3P08254 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP3P08254 AP000254.1-201ENST00000609934 520 ntBASIC4.07□□□□□ -1.76
MMP3P08254 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP3P08254 AC068722.2-201ENST00000618734 544 ntBASIC4.07□□□□□ -1.76
MMP3P08254 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP3P08254 AC092656.1-203ENST00000624134 423 ntBASIC4.07□□□□□ -1.76
MMP3P08254 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.07□□□□□ -1.76
MMP3P08254 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP3P08254 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP3P08254 AC006927.3-201ENST00000638789 384 ntBASIC4.07□□□□□ -1.76
MMP3P08254 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP3P08254 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP3P08254 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.07□□□□□ -1.76
MMP3P08254 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms