Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 U3.12-201ENST00000364498 214 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 DSTNP4-201ENST00000399472 474 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 RPS4XP8-201ENST00000402039 771 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AC010285.1-201ENST00000470580 392 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 RPL23AP45-201ENST00000476406 468 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 RPS27P27-201ENST00000498779 255 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 KLHL2P1-201ENST00000508691 521 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AC104986.1-201ENST00000517978 436 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 IGKV2D-36-201ENST00000518643 226 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AC090136.1-201ENST00000520009 240 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 SETP2-201ENST00000553886 926 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AC027176.1-201ENST00000560204 514 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 RPL23AP84-201ENST00000571193 464 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AC018618.2-201ENST00000604770 446 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AL359198.2-201ENST00000611836 194 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 U4.3-201ENST00000621047 82 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQB2P05538 MAPK10-266ENST00000641066 6555 ntBASIC2.5□□□□□ -2.01
HLA-DQB2P05538 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC069528.2-201ENST00000624849 1991 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AL672167.1-206ENST00000356293 943 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 RNU6-1181P-201ENST00000384191 106 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 Y_RNA.510-201ENST00000384511 114 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AL121972.1-201ENST00000402023 252 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 SFR1P1-201ENST00000403720 688 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC073264.1-201ENST00000411508 416 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 SSXP9-201ENST00000417503 292 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 RFESDP1-201ENST00000422350 461 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 RPL36P19-201ENST00000430744 301 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC068135.1-201ENST00000446164 246 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 OR6K1P-201ENST00000456766 971 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC008571.1-201ENST00000467232 300 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC126389.1-201ENST00000477436 290 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 EIF5A2P1-201ENST00000564027 460 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 MIR4504-201ENST00000577413 92 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 MIR3162-201ENST00000581818 82 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC090312.2-201ENST00000582687 378 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC008687.2-201ENST00000597865 520 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 NRBF2P5-201ENST00000603087 788 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AC007621.1-201ENST00000604544 437 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 AL009028.1-201ENST00000604895 802 ntBASIC2.49□□□□□ -2.01
HLA-DQB2P05538 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HLA-DQB2P05538 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 SNORA27.3-201ENST00000364937 134 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC109780.2-201ENST00000413467 845 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 OFD1P18Y-201ENST00000420889 959 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC109583.1-201ENST00000432156 268 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 RSL24D1P2-201ENST00000445584 366 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AP000705.1-201ENST00000454567 350 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC087879.1-201ENST00000474343 374 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms