Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFAP04085 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFAP04085 AC012669.1-201ENST00000603209 283 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 AL355598.1-201ENST00000604169 202 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
PDGFAP04085 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFAP04085 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFAP04085 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFAP04085 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFAP04085 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFAP04085 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFAP04085 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFAP04085 AC018809.2-201ENST00000602436 3823 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFAP04085 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFAP04085 SNORD62.1-201ENST00000362541 86 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 RNU6-702P-201ENST00000364982 107 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 RNU6-1318P-201ENST00000365389 103 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 RNU6-505P-201ENST00000384427 107 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 RNU6-95P-201ENST00000384697 107 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDGFAP04085 RPS4XP7-201ENST00000406274 780 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 RNU2-43P-201ENST00000410306 190 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 AC007562.1-201ENST00000421819 517 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFAP04085 NRBF2P3-201ENST00000432731 865 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 AC090774.1-201ENST00000435925 246 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFAP04085 AL590399.6-201ENST00000446396 307 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFAP04085 RPL7L1P1-201ENST00000448259 785 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 RPL37P6-201ENST00000460682 294 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 AC128713.1-201ENST00000471495 306 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 RN7SL547P-201ENST00000490793 290 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFAP04085 RNU6-470P-201ENST00000515954 104 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 RNU6-307P-201ENST00000516743 106 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFAP04085 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.38□□□□□ -1.55
PDGFAP04085 OR4H12P-201ENST00000556269 907 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFAP04085 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFAP04085 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 AL122125.1-201ENST00000616999 600 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFAP04085 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 PABPC1P6-201ENST00000445594 1829 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFAP04085 HSPA8P4-201ENST00000511877 1920 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.38□□□□□ -1.55
PDGFAP04085 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFAP04085 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFAP04085 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDGFAP04085 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PDGFAP04085 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 AC004076.2-201ENST00000620532 3323 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AC144833.1-201ENST00000567953 4089 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AC074029.4-201ENST00000624796 1859 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFAP04085 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 MT-TG-201ENST00000387429 68 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 RNU6-817P-201ENST00000391083 104 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 MIR1286-201ENST00000408112 78 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 Z99755.1-201ENST00000414048 380 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AC080125.1-201ENST00000414888 684 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AC092809.3-201ENST00000415453 231 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AL133482.1-201ENST00000415988 498 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFAP04085 PPP1R11P2-201ENST00000423543 382 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AL138785.1-201ENST00000425821 331 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 USMG5P1-201ENST00000425964 177 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFAP04085 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFAP04085 RPS12P17-201ENST00000438591 377 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AL663074.2-201ENST00000440621 479 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 RPL29P29-201ENST00000448725 423 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 SDC4P-201ENST00000453285 601 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFAP04085 RPL5P30-201ENST00000465511 891 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AC087884.1-201ENST00000469738 328 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AL035690.1-201ENST00000490892 383 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.37□□□□□ -1.55
PDGFAP04085 IGBP1P1-201ENST00000554337 1009 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AL359219.2-201ENST00000555184 348 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms