Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
MT-ND4P03905 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND4P03905 SEPT14P24-201ENST00000447236 180 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 TRBV26-201ENST00000456572 344 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.59□□□□□ -1.99
MT-ND4P03905 RPS17P11-201ENST00000474297 293 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 RPL23AP11-201ENST00000475260 469 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 RPL9P33-201ENST00000484311 566 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 HSPD1P15-201ENST00000505573 1122 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.59□□□□□ -1.99
MT-ND4P03905 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND4P03905 RNA5SP135-201ENST00000517019 125 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AC125611.2-201ENST00000551907 647 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 AL121603.1-201ENST00000553815 142 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 DNAJC8P1-201ENST00000554535 372 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.59□□□□□ -1.99
MT-ND4P03905 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND4P03905 MTCO3P13-201ENST00000577757 781 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND4P03905 AL355812.1-201ENST00000603215 216 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.59□□□□□ -1.99
MT-ND4P03905 VN1R74P-201ENST00000613259 503 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.59□□□□□ -1.99
MT-ND4P03905 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
MT-ND4P03905 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
MT-ND4P03905 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.59□□□□□ -2
MT-ND4P03905 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.59□□□□□ -2
MT-ND4P03905 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
MT-ND4P03905 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MT-ND4P03905 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
MT-ND4P03905 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MT-ND4P03905 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
MT-ND4P03905 RNU6-251P-201ENST00000363235 104 ntBASIC2.58□□□□□ -2
MT-ND4P03905 RNU5B-1-201ENST00000363286 116 ntBASIC2.58□□□□□ -2
MT-ND4P03905 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
MT-ND4P03905 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
MT-ND4P03905 SNORA7.4-201ENST00000384249 137 ntBASIC2.58□□□□□ -2
MT-ND4P03905 MIR181A2-201ENST00000384863 110 ntBASIC2.58□□□□□ -2
MT-ND4P03905 MIR183-201ENST00000384958 110 ntBASIC2.58□□□□□ -2
MT-ND4P03905 RNU6-821P-201ENST00000390995 107 ntBASIC2.58□□□□□ -2
MT-ND4P03905 RNA5SP38-201ENST00000410750 119 ntBASIC2.58□□□□□ -2
MT-ND4P03905 RNU4-47P-201ENST00000410876 114 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.58□□□□□ -2
MT-ND4P03905 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND4P03905 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.58□□□□□ -2
MT-ND4P03905 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND4P03905 AL592437.1-201ENST00000443781 492 ntBASIC2.58□□□□□ -2
MT-ND4P03905 Z75741.1-201ENST00000446793 314 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND4P03905 MTCO3P2-201ENST00000457365 171 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC109925.1-201ENST00000478069 331 ntBASIC2.58□□□□□ -2
MT-ND4P03905 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND4P03905 DYNLL1P6-201ENST00000503440 264 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC084024.2-201ENST00000503480 791 ntBASIC2.58□□□□□ -2
MT-ND4P03905 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.58□□□□□ -2
MT-ND4P03905 AC104986.1-201ENST00000517978 436 ntBASIC2.58□□□□□ -2
MT-ND4P03905 ZNF705CP-201ENST00000530515 889 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND4P03905 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND4P03905 RN7SL339P-201ENST00000580597 296 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AL031985.2-201ENST00000600955 480 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND4P03905 RPAP2P1-201ENST00000603626 1168 ntBASIC2.58□□□□□ -2
MT-ND4P03905 PRELID3BP8-201ENST00000604148 295 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC009220.3-201ENST00000604318 586 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC128687.1-201ENST00000605304 619 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC124312.4-201ENST00000605533 310 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC006329.2-201ENST00000611491 394 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AL359198.2-201ENST00000611836 194 ntBASIC2.58□□□□□ -2
MT-ND4P03905 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.58□□□□□ -2
MT-ND4P03905 AC006133.1-201ENST00000617106 264 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND4P03905 VN1R7P-201ENST00000619242 903 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC009318.4-201ENST00000620496 486 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC068880.4-201ENST00000623082 495 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC040168.1-201ENST00000623594 991 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC093875.1-201ENST00000623688 504 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC018692.3-201ENST00000623929 123 ntBASIC2.58□□□□□ -2
MT-ND4P03905 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.58□□□□□ -2
MT-ND4P03905 U6.105-201ENST00000637379 88 ntBASIC2.58□□□□□ -2
MT-ND4P03905 MIR622-201ENST00000638396 96 ntBASIC2.58□□□□□ -2
MT-ND4P03905 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
MT-ND4P03905 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
MT-ND4P03905 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MT-ND4P03905 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.58□□□□□ -2
MT-ND4P03905 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MT-ND4P03905 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.57□□□□□ -2
MT-ND4P03905 RNU6-799P-201ENST00000363567 107 ntBASIC2.57□□□□□ -2
MT-ND4P03905 SNORD82-201ENST00000365530 70 ntBASIC2.57□□□□□ -2
MT-ND4P03905 RNU6-1027P-201ENST00000383998 107 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms