Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC027287.1-201ENST00000553115 1453 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN1O95832 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN1O95832 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CLDN1O95832 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN1O95832 AC130650.2-201ENST00000618736 2403 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 XIAPP3-201ENST00000312918 795 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 RPL21P132-201ENST00000331267 462 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 Y_RNA.201-201ENST00000364052 96 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN1O95832 RNU6-1226P-201ENST00000384317 107 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 RN7SKP56-201ENST00000410513 331 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 RNA5SP120-201ENST00000410900 112 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 RNU6-920P-201ENST00000410926 92 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN1O95832 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN1O95832 MTND1P20-201ENST00000430341 950 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN1O95832 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN1O95832 AC073063.1-201ENST00000434352 607 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN1O95832 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN1O95832 AC129850.1-201ENST00000436203 508 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 MTND4P6-201ENST00000438297 472 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN1O95832 HMGB3P22-202ENST00000451823 572 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 RPL23AP35-201ENST00000451906 501 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC104073.1-201ENST00000451988 151 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC092754.2-201ENST00000463506 460 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC097493.1-201ENST00000463958 372 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC092757.1-201ENST00000467293 467 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 RAP1BP2-201ENST00000478270 544 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC069499.1-201ENST00000489433 509 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 OR2A20P-203ENST00000498397 1268 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN1O95832 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN1O95832 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN1O95832 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.39□□□□□ -1.87
CLDN1O95832 AC104986.1-201ENST00000517978 436 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC008802.1-201ENST00000519121 791 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC106038.2-201ENST00000520706 568 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN1O95832 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN1O95832 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN1O95832 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN1O95832 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN1O95832 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN1O95832 LSM6P2-201ENST00000552208 177 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN1O95832 MTCYBP33-201ENST00000575007 1130 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 MIR4504-201ENST00000577413 92 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 VN1R79P-201ENST00000593540 513 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN1O95832 AP001981.2-201ENST00000603241 418 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 OR2AS2P-201ENST00000606902 342 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN1O95832 MIR8057-201ENST00000620957 69 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 Z69908.1-201ENST00000622603 247 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC139792.2-201ENST00000624218 587 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC007494.3-201ENST00000624660 743 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 AC127502.3-201ENST00000636170 1206 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 FAM157B-203ENST00000639350 358 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN1O95832 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN1O95832 AC004944.1-201ENST00000517807 3059 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN1O95832 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN1O95832 CR381670.1-201ENST00000624291 1693 ntBASIC3.39□□□□□ -1.87
CLDN1O95832 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN1O95832 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN1O95832 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLDN1O95832 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN1O95832 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CLDN1O95832 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CLDN1O95832 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 AL672167.1-206ENST00000356293 943 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 RNU6-462P-201ENST00000362659 105 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 Y_RNA.510-201ENST00000384511 114 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 Y_RNA.560-201ENST00000384689 102 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLDN1O95832 ARF4P3-201ENST00000397387 509 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 RPS3AP26-201ENST00000398259 784 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 RPS15AP38-201ENST00000413110 372 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 NPM1P11-201ENST00000417106 855 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN1O95832 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN1O95832 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN1O95832 AC087650.1-201ENST00000431445 468 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 MTCYBP39-201ENST00000437562 491 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 RPS3AP46-201ENST00000448352 682 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN1O95832 OR6C5P-201ENST00000452388 923 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms