Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCD1O75127 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PTCD1O75127 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
PTCD1O75127 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
PTCD1O75127 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 TTC41P-205ENST00000551270 3963 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 AC112198.2-201ENST00000426589 6996 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PTCD1O75127 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCD1O75127 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCD1O75127 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PTCD1O75127 Y_RNA.387-201ENST00000383918 102 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 Y_RNA.401-201ENST00000383965 117 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RNU6-43P-201ENST00000384302 107 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RNU4-26P-201ENST00000410270 107 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RNU2-15P-201ENST00000410692 191 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCD1O75127 AL358176.3-201ENST00000420757 454 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 AL451054.2-201ENST00000420896 202 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RPL12P34-201ENST00000424532 479 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RPL34P6-201ENST00000432390 345 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCD1O75127 RAC1P7-201ENST00000445367 377 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCD1O75127 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCD1O75127 AC108059.3-201ENST00000456388 214 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RPS29P15-201ENST00000458329 171 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 AL163540.1-201ENST00000485382 386 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RN7SL558P-201ENST00000497468 299 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 TTC39CP1-201ENST00000512513 755 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 AC105417.1-201ENST00000514691 285 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 SNORD27.1-201ENST00000516319 72 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 Y_RNA.691-201ENST00000516611 103 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RN7SKP256-201ENST00000517201 314 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCD1O75127 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCD1O75127 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCD1O75127 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCD1O75127 AP000859.1-201ENST00000525536 307 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 AP001781.1-201ENST00000530977 207 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCD1O75127 AC093249.4-201ENST00000564755 259 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 RN7SL652P-201ENST00000577769 300 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 AC110743.1-201ENST00000584870 478 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PTCD1O75127 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCD1O75127 AC016925.2-201ENST00000605108 242 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 AC021646.1-201ENST00000605469 484 ntBASIC6.16□□□□□ -1.42
PTCD1O75127 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
PTCD1O75127 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCD1O75127 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PTCD1O75127 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PTCD1O75127 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCD1O75127 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCD1O75127 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCD1O75127 AP000756.2-201ENST00000624168 2567 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCD1O75127 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PTCD1O75127 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCD1O75127 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
PTCD1O75127 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
PTCD1O75127 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCD1O75127 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTCD1O75127 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTCD1O75127 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTCD1O75127 RNU4-66P-201ENST00000365199 138 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 RNU4-20P-201ENST00000365601 151 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 MIR19A-201ENST00000384878 82 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 AL583835.1-201ENST00000399570 407 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 RNU6-193P-201ENST00000410977 107 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 RN7SKP247-201ENST00000411094 308 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCD1O75127 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCD1O75127 AC004975.1-201ENST00000428733 208 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCD1O75127 FTLP19-201ENST00000433300 394 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCD1O75127 AC239809.1-201ENST00000450470 217 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 NUTF2P7-201ENST00000453086 375 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 Y_RNA.639-201ENST00000458981 102 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 SNORD19B-201ENST00000459623 84 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 RPL21P99-201ENST00000480369 423 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 AF213884.1-201ENST00000488102 463 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCD1O75127 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 AC103843.2-201ENST00000530523 682 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 NCAPGP2-201ENST00000557911 754 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCD1O75127 AC010653.1-201ENST00000571108 881 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 SNORA74C-1-201ENST00000580726 201 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 COX6CP3-201ENST00000580869 223 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 MIR3149-201ENST00000584629 83 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 AC004853.1-201ENST00000604902 698 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 AL365434.2-201ENST00000607979 234 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 AL031666.3-201ENST00000609320 1006 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms