Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL356055.1-201ENST00000602528 446 ntBASIC4.34□□□□□ -1.71
PROM1O43490 BNIP3P9-201ENST00000603714 553 ntBASIC4.34□□□□□ -1.71
PROM1O43490 AL365503.1-201ENST00000605247 905 ntBASIC4.34□□□□□ -1.71
PROM1O43490 OR10AB1P-201ENST00000609613 938 ntBASIC4.34□□□□□ -1.71
PROM1O43490 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.34□□□□□ -1.71
PROM1O43490 AL158196.1-201ENST00000616786 434 ntBASIC4.34□□□□□ -1.71
PROM1O43490 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.34□□□□□ -1.71
PROM1O43490 AL445264.1-201ENST00000621719 171 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RNU6-156P-201ENST00000621869 107 ntBASIC4.34□□□□□ -1.71
PROM1O43490 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PROM1O43490 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PROM1O43490 AC018529.3-201ENST00000624212 2254 ntBASIC4.34□□□□□ -1.72
PROM1O43490 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.34□□□□□ -1.72
PROM1O43490 SAGE4P-201ENST00000442271 3381 ntBASIC4.34□□□□□ -1.72
PROM1O43490 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
PROM1O43490 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PROM1O43490 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.34□□□□□ -1.72
PROM1O43490 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.33□□□□□ -1.72
PROM1O43490 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
PROM1O43490 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.33□□□□□ -1.72
PROM1O43490 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PROM1O43490 AC021146.4-201ENST00000309229 279 ntBASIC4.33□□□□□ -1.72
PROM1O43490 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
PROM1O43490 Y_RNA.160-201ENST00000363677 92 ntBASIC4.33□□□□□ -1.72
PROM1O43490 RNU6-1103P-201ENST00000384150 107 ntBASIC4.33□□□□□ -1.72
PROM1O43490 SNORA70E-201ENST00000384492 135 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AL049693.1-201ENST00000402760 611 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AL024474.1-201ENST00000404655 591 ntBASIC4.33□□□□□ -1.72
PROM1O43490 RNU2-21P-201ENST00000410368 188 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AC069218.2-201ENST00000411665 344 ntBASIC4.33□□□□□ -1.72
PROM1O43490 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.33□□□□□ -1.72
PROM1O43490 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.33□□□□□ -1.72
PROM1O43490 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.33□□□□□ -1.72
PROM1O43490 COX6CP15-201ENST00000426313 211 ntBASIC4.33□□□□□ -1.72
PROM1O43490 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 MTCO2P11-201ENST00000431069 680 ntBASIC4.33□□□□□ -1.72
PROM1O43490 RPS6P12-201ENST00000432491 726 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AC104850.1-201ENST00000435940 476 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.33□□□□□ -1.72
PROM1O43490 AC069285.2-201ENST00000440210 275 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.33□□□□□ -1.72
PROM1O43490 TPT1P14-201ENST00000448018 505 ntBASIC4.33□□□□□ -1.72
PROM1O43490 MTND1P12-201ENST00000455231 147 ntBASIC4.33□□□□□ -1.72
PROM1O43490 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.33□□□□□ -1.72
PROM1O43490 RPL7P15-201ENST00000461190 712 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AC010469.1-201ENST00000463864 576 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AC023598.1-201ENST00000472521 361 ntBASIC4.33□□□□□ -1.72
PROM1O43490 RPL12P20-201ENST00000475538 479 ntBASIC4.33□□□□□ -1.72
PROM1O43490 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.33□□□□□ -1.72
PROM1O43490 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.33□□□□□ -1.72
PROM1O43490 AC111000.3-201ENST00000508057 576 ntBASIC4.33□□□□□ -1.72
PROM1O43490 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.33□□□□□ -1.72
PROM1O43490 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.33□□□□□ -1.72
PROM1O43490 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.33□□□□□ -1.72
PROM1O43490 RNA5SP446-201ENST00000515955 82 ntBASIC4.33□□□□□ -1.72
PROM1O43490 Y_RNA.693-201ENST00000516641 110 ntBASIC4.33□□□□□ -1.72
PROM1O43490 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
PROM1O43490 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.33□□□□□ -1.72
PROM1O43490 AC124068.1-201ENST00000563131 678 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AC107954.1-201ENST00000565906 727 ntBASIC4.33□□□□□ -1.72
PROM1O43490 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.33□□□□□ -1.72
PROM1O43490 AC011468.4-201ENST00000603942 409 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AC113194.1-201ENST00000606037 500 ntBASIC4.33□□□□□ -1.72
PROM1O43490 AC008945.2-201ENST00000606056 604 ntBASIC4.33□□□□□ -1.72
PROM1O43490 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.33□□□□□ -1.72
PROM1O43490 AC015813.4-201ENST00000610469 179 ntBASIC4.33□□□□□ -1.72
PROM1O43490 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PROM1O43490 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.33□□□□□ -1.72
PROM1O43490 MIR1321-201ENST00000637766 79 ntBASIC4.33□□□□□ -1.72
PROM1O43490 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
PROM1O43490 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PROM1O43490 AC092125.1-201ENST00000562568 1995 ntBASIC4.33□□□□□ -1.72
PROM1O43490 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PROM1O43490 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 NMD3P1-201ENST00000439704 1488 ntBASIC4.32□□□□□ -1.72
PROM1O43490 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PROM1O43490 CBX3P1-201ENST00000325243 554 ntBASIC4.32□□□□□ -1.72
PROM1O43490 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.32□□□□□ -1.72
PROM1O43490 Y_RNA.11-201ENST00000362375 109 ntBASIC4.32□□□□□ -1.72
PROM1O43490 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PROM1O43490 SNORA70F-201ENST00000384142 135 ntBASIC4.32□□□□□ -1.72
PROM1O43490 RNU6-761P-201ENST00000384148 107 ntBASIC4.32□□□□□ -1.72
PROM1O43490 MIR153-1-201ENST00000384914 90 ntBASIC4.32□□□□□ -1.72
PROM1O43490 RNA5SP397-201ENST00000391323 118 ntBASIC4.32□□□□□ -1.72
PROM1O43490 MTCO2P5-201ENST00000422621 426 ntBASIC4.32□□□□□ -1.72
PROM1O43490 RSL24D1P6-201ENST00000426934 401 ntBASIC4.32□□□□□ -1.72
PROM1O43490 RPL21P91-201ENST00000429231 479 ntBASIC4.32□□□□□ -1.72
PROM1O43490 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.32□□□□□ -1.72
PROM1O43490 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms