Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL139413.1-201ENST00000421309 217 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 MTCO3P1-205ENST00000422088 832 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC010099.3-201ENST00000423896 409 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC006989.1-201ENST00000427212 131 ntBASIC3.16□□□□□ -1.9
CDX4O14627 BX890604.2-201ENST00000427883 474 ntBASIC3.16□□□□□ -1.9
CDX4O14627 RPL7P34-201ENST00000433316 712 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.16□□□□□ -1.9
CDX4O14627 HMGN2P21-201ENST00000447764 270 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.16□□□□□ -1.9
CDX4O14627 MTCO1P30-201ENST00000515244 580 ntBASIC3.16□□□□□ -1.9
CDX4O14627 HNRNPKP5-201ENST00000515300 253 ntBASIC3.16□□□□□ -1.9
CDX4O14627 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.16□□□□□ -1.9
CDX4O14627 MRPS36P3-201ENST00000519284 130 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.16□□□□□ -1.9
CDX4O14627 AC008489.1-201ENST00000524271 483 ntBASIC3.16□□□□□ -1.9
CDX4O14627 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
CDX4O14627 MTATP6P15-201ENST00000527233 835 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CDX4O14627 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.16□□□□□ -1.9
CDX4O14627 H3F3AP1-201ENST00000559984 334 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.16□□□□□ -1.9
CDX4O14627 MTND3P13-201ENST00000574391 343 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC006270.2-201ENST00000578523 652 ntBASIC3.16□□□□□ -1.9
CDX4O14627 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 VN1R83P-201ENST00000595685 445 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AL035411.2-201ENST00000604022 421 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AL009028.1-201ENST00000604895 802 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC107952.2-201ENST00000606048 486 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 AL157817.1-201ENST00000614264 790 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC231759.1-201ENST00000616455 597 ntBASIC3.16□□□□□ -1.9
CDX4O14627 MIR4727-201ENST00000622232 55 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC098679.5-201ENST00000624394 571 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC009039.2-201ENST00000624524 529 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AC090897.3-201ENST00000636973 1157 ntBASIC3.16□□□□□ -1.9
CDX4O14627 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX4O14627 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX4O14627 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX4O14627 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX4O14627 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDX4O14627 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDX4O14627 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CDX4O14627 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.15□□□□□ -1.9
CDX4O14627 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDX4O14627 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDX4O14627 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDX4O14627 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDX4O14627 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.15□□□□□ -1.91
CDX4O14627 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDX4O14627 RNU1-70P-201ENST00000362618 164 ntBASIC3.15□□□□□ -1.91
CDX4O14627 RNU6-251P-201ENST00000363235 104 ntBASIC3.15□□□□□ -1.91
CDX4O14627 SUGT1P1-201ENST00000379514 476 ntBASIC3.15□□□□□ -1.91
CDX4O14627 RNU6-413P-201ENST00000384115 107 ntBASIC3.15□□□□□ -1.91
CDX4O14627 RNU6-636P-201ENST00000384598 107 ntBASIC3.15□□□□□ -1.91
CDX4O14627 SNORA40.2-201ENST00000390847 128 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AL023807.1-201ENST00000407932 359 ntBASIC3.15□□□□□ -1.91
CDX4O14627 RPS24P7-201ENST00000416921 246 ntBASIC3.15□□□□□ -1.91
CDX4O14627 MRPS36P1-201ENST00000421291 307 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AL513175.2-201ENST00000422071 443 ntBASIC3.15□□□□□ -1.91
CDX4O14627 RPL21P109-201ENST00000422213 475 ntBASIC3.15□□□□□ -1.91
CDX4O14627 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX4O14627 OOSP1P1-201ENST00000423265 274 ntBASIC3.15□□□□□ -1.91
CDX4O14627 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.15□□□□□ -1.91
CDX4O14627 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX4O14627 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX4O14627 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX4O14627 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX4O14627 AC007327.1-201ENST00000447461 264 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX4O14627 AC005410.1-202ENST00000460347 485 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC010307.1-201ENST00000467206 836 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC108734.3-201ENST00000481241 1165 ntBASIC3.15□□□□□ -1.91
CDX4O14627 RN7SL432P-201ENST00000484057 298 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC078817.1-201ENST00000492623 435 ntBASIC3.15□□□□□ -1.91
CDX4O14627 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.15□□□□□ -1.91
CDX4O14627 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX4O14627 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.15□□□□□ -1.91
CDX4O14627 AC016065.2-201ENST00000514530 444 ntBASIC3.15□□□□□ -1.91
CDX4O14627 RNU4-60P-201ENST00000517239 135 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC009812.2-201ENST00000517657 457 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC087808.1-201ENST00000520501 361 ntBASIC3.15□□□□□ -1.91
CDX4O14627 ZNF705CP-201ENST00000530515 889 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.15□□□□□ -1.91
CDX4O14627 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX4O14627 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX4O14627 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX4O14627 MRPS36P5-201ENST00000551909 298 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.15□□□□□ -1.91
CDX4O14627 GTF3AP2-201ENST00000557014 266 ntBASIC3.15□□□□□ -1.91
CDX4O14627 MIR2682-201ENST00000580305 110 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC004223.2-201ENST00000590309 544 ntBASIC3.15□□□□□ -1.91
CDX4O14627 VN1R78P-201ENST00000597393 564 ntBASIC3.15□□□□□ -1.91
CDX4O14627 MTND3P19-201ENST00000603825 345 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC016877.3-201ENST00000606778 504 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms