Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNRPGP3-201ENST00000469405 227 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC188H7C350 HMGB3P15-201ENST00000507326 574 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AC006499.2-201ENST00000513470 337 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 RNU6-1095P-201ENST00000516148 108 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 RNA5SP468-201ENST00000516782 93 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AC018630.1-201ENST00000541376 925 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 OR6C7P-201ENST00000547875 934 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 MTND1P24-201ENST00000552175 861 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC188H7C350 ZNF192P1-203ENST00000565888 810 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AC061975.8-201ENST00000587058 721 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AP001029.3-201ENST00000588063 596 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC188H7C350 TUG1_1.1-201ENST00000610654 145 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 TUSC7.1-201ENST00000610969 165 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AL450489.1-201ENST00000612071 468 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC188H7C350 AC015967.1-201ENST00000619893 476 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC188H7C350 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC188H7C350 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AL672296.1-201ENST00000427780 2158 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCDC188H7C350 AL133383.2-201ENST00000622958 2336 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 SPRR2C-201ENST00000290702 219 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC188H7C350 SNORA4.1-201ENST00000364263 144 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.6□□□□□ -1.83
CCDC188H7C350 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
CCDC188H7C350 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC188H7C350 AL356131.1-201ENST00000405826 414 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 RNU6-757P-201ENST00000410334 100 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AC126124.2-201ENST00000413542 321 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AL008987.1-201ENST00000415528 237 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 HIGD1AP15-201ENST00000416198 280 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC188H7C350 OR1AA1P-201ENST00000419597 916 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC188H7C350 AL953862.1-201ENST00000423016 168 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AC007742.1-201ENST00000425789 329 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC188H7C350 ELOCP26-201ENST00000436067 329 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CCDC188H7C350 PAXBP1P1-201ENST00000449315 447 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 RPL23AP35-201ENST00000451906 501 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 ANKRD26P4-201ENST00000455755 950 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 CEACAMP4-201ENST00000457676 421 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC188H7C350 AC096751.1-202ENST00000502691 1067 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC188H7C350 IGKV2D-19-201ENST00000523346 262 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC188H7C350 SYF2P1-201ENST00000550658 413 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC188H7C350 SETP7-201ENST00000552169 453 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC188H7C350 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC188H7C350 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC188H7C350 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC188H7C350 BNIP3P22-201ENST00000593399 556 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 VN1R85P-201ENST00000601587 426 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AC004853.1-201ENST00000604902 698 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AL390208.1-201ENST00000605885 644 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AC090425.2-201ENST00000608818 501 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 ZYXP1-201ENST00000617638 118 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AC023510.2-201ENST00000622162 746 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 AC079228.1-201ENST00000624774 1049 ntBASIC3.6□□□□□ -1.83
CCDC188H7C350 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CCDC188H7C350 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC188H7C350 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC188H7C350 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCDC188H7C350 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC188H7C350 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCDC188H7C350 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC188H7C350 MIR372-201ENST00000362225 67 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 U3.11-201ENST00000364476 212 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC188H7C350 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 TPMTP2-201ENST00000414372 726 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC188H7C350 RPL7P30-201ENST00000420888 709 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC188H7C350 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC188H7C350 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC188H7C350 MTCO2P20-201ENST00000437339 673 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 MTCYBP31-201ENST00000438855 1122 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 HSFY6P-201ENST00000445573 403 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC188H7C350 RPL23AP62-201ENST00000463396 453 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC188H7C350 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC188H7C350 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC188H7C350 RPL21P129-201ENST00000491732 478 ntBASIC3.59□□□□□ -1.83
CCDC188H7C350 AC021146.5-201ENST00000503544 545 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms