Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC008489.1-201ENST00000524271 483 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AP000926.4-201ENST00000527351 454 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC005832.3-201ENST00000537929 631 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC125611.1-201ENST00000549563 229 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC011611.1-201ENST00000552179 197 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 MIR4474-201ENST00000579189 78 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AL355365.1-201ENST00000616480 294 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC091953.5-201ENST00000622919 233 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AP003355.3-201ENST00000623465 114 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 CDR1-202ENST00000625883 1485 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NPIPA2E9PIF3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AL079305.1-201ENST00000623159 3008 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 RNU6-525P-201ENST00000363685 104 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AL590084.1-201ENST00000407885 387 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 RNA5SP80-201ENST00000410475 111 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 RPL30P2-201ENST00000414021 291 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC017079.2-201ENST00000416102 485 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 USP9YP24-201ENST00000434374 697 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 TRIM60P18-201ENST00000441518 828 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 USP9YP17-201ENST00000444617 696 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC007327.1-201ENST00000447461 264 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 RPL39P6-201ENST00000448289 150 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 MTCO3P16-201ENST00000454456 754 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 MTCYBP17-201ENST00000503579 789 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC114322.1-201ENST00000506771 926 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 HMGB1P28-201ENST00000507778 552 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC010625.1-201ENST00000511296 403 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AP001636.2-201ENST00000525517 696 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AL132857.1-201ENST00000555180 708 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 NCAPGP2-201ENST00000557911 754 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 MIR5186-201ENST00000577504 120 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 RPP40P2-201ENST00000603596 712 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC106052.1-201ENST00000608029 497 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC009974.1-201ENST00000608881 455 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 PWAR6-201ENST00000552334 4618 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.21□□□□□ -1.9
NPIPA2E9PIF3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 AC007656.2-201ENST00000624902 4547 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 RNU4-35P-201ENST00000362588 141 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 SNORD51-201ENST00000384320 80 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 MIR483-201ENST00000385070 76 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 CYCSP45-201ENST00000402289 315 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 ERHP2-201ENST00000402323 299 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 RNU6-584P-201ENST00000410350 95 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 RNU2-15P-201ENST00000410692 191 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 AC068533.2-201ENST00000411872 306 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 AC092447.6-201ENST00000414578 210 ntBASIC3.2□□□□□ -1.9
NPIPA2E9PIF3 AC127526.1-201ENST00000417526 366 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms