Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LINC01548A6NM66 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LINC01548A6NM66 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC01548A6NM66 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC01548A6NM66 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LINC01548A6NM66 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC01548A6NM66 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC01548A6NM66 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 TLK1P1-201ENST00000456760 2440 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AL118496.1-201ENST00000440201 1812 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 RNU2-15P-201ENST00000410692 191 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 RNU6-193P-201ENST00000410977 107 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 RNU6-603P-201ENST00000411403 107 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 ERLEC1P1-201ENST00000433806 578 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 RPS17P8-201ENST00000434525 335 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 OR1H1P-201ENST00000448731 937 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AL590639.1-201ENST00000456484 337 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 PPP1R2P5-201ENST00000457256 603 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 RNU6-329P-201ENST00000459618 107 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 RN7SL517P-201ENST00000462240 305 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AL049714.1-201ENST00000466686 347 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC096576.1-201ENST00000489014 359 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AL139099.1-201ENST00000497398 403 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC110792.2-201ENST00000510278 224 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 TTC39CP1-201ENST00000512513 755 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 RNU6-327P-201ENST00000516270 127 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 BNIP3P6-201ENST00000549284 499 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 SETP2-201ENST00000553886 926 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 RPL21P12-201ENST00000559810 515 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 MIR3667-201ENST00000581025 74 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC008638.3-201ENST00000603341 463 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC090948.1-201ENST00000607464 549 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC103710.2-201ENST00000609912 942 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AL590099.1-201ENST00000615276 138 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 AL133216.2-202ENST00000634512 349 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AP000756.2-201ENST00000624168 2567 ntBASIC3.8□□□□□ -1.8
LINC01548A6NM66 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC01548A6NM66 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.8□□□□□ -1.8
LINC01548A6NM66 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC01548A6NM66 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC01548A6NM66 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC01548A6NM66 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC01548A6NM66 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC01548A6NM66 AL122126.1-201ENST00000546905 1318 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC01548A6NM66 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC01548A6NM66 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC01548A6NM66 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC01548A6NM66 SNORA62.1-201ENST00000364287 154 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 Y_RNA.384-201ENST00000383909 102 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 MIR558-201ENST00000384920 94 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 MIR454-201ENST00000390180 115 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LINC01548A6NM66 RNU1-82P-201ENST00000390851 165 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC01548A6NM66 AL583835.1-201ENST00000399570 407 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC01548A6NM66 RNA5SP296-201ENST00000410523 111 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC01548A6NM66 AC114755.2-201ENST00000413520 361 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC01548A6NM66 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.79□□□□□ -1.8
LINC01548A6NM66 NCOR1P3-201ENST00000420479 303 ntBASIC3.79□□□□□ -1.8
LINC01548A6NM66 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC01548A6NM66 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.79□□□□□ -1.8
LINC01548A6NM66 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC01548A6NM66 NRBF2P3-201ENST00000432731 865 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms