Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 RNU6-1120P-201ENST00000362988 108 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 SNORD113.2-201ENST00000364166 89 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 RNU6-335P-201ENST00000364563 113 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 RNU4-12P-201ENST00000365233 139 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 RNU6-169P-201ENST00000365336 107 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 RNU6-456P-201ENST00000384493 107 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 ELOCP19-201ENST00000411919 318 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC016696.1-201ENST00000446949 318 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 HMGB3P30-201ENST00000457863 606 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC103987.1-201ENST00000473394 348 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 RPS3AP14-201ENST00000483907 780 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC019235.1-201ENST00000503847 207 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 RNU6-410P-201ENST00000517006 107 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC100870.1-201ENST00000522035 505 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AP004371.1-201ENST00000525240 214 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 MTCYBP41-201ENST00000528913 1123 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC128657.1-201ENST00000549459 145 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AL157687.1-201ENST00000554853 619 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 SUB1P2-201ENST00000556401 297 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AL359212.1-201ENST00000556608 614 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 MIR4277-201ENST00000578298 84 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC105224.1-201ENST00000587055 421 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AL356218.2-201ENST00000605264 187 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 HMGN2P28-201ENST00000606102 262 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 FAM27B-201ENST00000610601 213 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 AL157786.1-207ENST00000627771 695 ntBASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA9Q9Y5G4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 HSPE1P11-201ENST00000339579 310 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 RNU6-1181P-201ENST00000384191 106 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 MIR135A2-201ENST00000384854 100 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC069157.1-201ENST00000421749 137 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 RPL23AP1-201ENST00000428990 471 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AL450023.3-201ENST00000440592 271 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AL162591.2-201ENST00000449634 317 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 MTND2P24-201ENST00000453434 806 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC007967.1-201ENST00000455422 1159 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC013267.1-201ENST00000458227 267 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 SNORD97-201ENST00000459187 142 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 RN7SKP122-201ENST00000515923 296 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 RN7SKP46-201ENST00000515942 234 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 OR5AQ1P-201ENST00000527596 927 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 CCNG2P1-201ENST00000549521 1000 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AL110118.1-201ENST00000553543 400 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 RN7SL176P-201ENST00000580352 264 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AL034351.1-201ENST00000605288 668 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC243312.2-201ENST00000623340 601 ntBASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA9Q9Y5G4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms