Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL121657.1-201ENST00000327215 531 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 RNU1-101P-201ENST00000391171 127 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 RPL21P3-201ENST00000395517 478 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 RNU6-1077P-201ENST00000410506 102 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 RNU2-47P-201ENST00000410649 186 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 RPL18P10-201ENST00000425606 538 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AL590233.1-201ENST00000430017 456 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AL117339.2-201ENST00000430475 180 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 SNRPEP4-201ENST00000435815 279 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC115115.1-201ENST00000449927 248 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC005297.2-201ENST00000450430 606 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 RPS29P33-201ENST00000456717 146 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC104982.1-201ENST00000478775 574 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC068724.1-201ENST00000487100 792 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 TMEM251P1-201ENST00000503717 318 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC112198.1-201ENST00000505369 1220 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 CBX3P3-201ENST00000508108 532 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 HMGN1P11-201ENST00000508668 303 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC113347.3-201ENST00000509113 148 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 RNU6-276P-201ENST00000516114 96 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC087499.8-201ENST00000578406 226 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC068790.4-201ENST00000602474 263 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC009570.1-201ENST00000609599 745 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC104763.3-201ENST00000613765 618 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC002076.2-201ENST00000617362 122 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AL158163.2-201ENST00000619110 700 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC004808.1-201ENST00000627671 721 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 MTND5P19-201ENST00000424872 1794 ntBASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 SPRR2C-201ENST00000290702 219 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 RNU5E-10P-201ENST00000363506 118 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 Y_RNA.408-201ENST00000383987 102 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC068533.2-201ENST00000411872 306 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AL449283.1-202ENST00000418249 604 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 USP9YP36-201ENST00000424581 829 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 RPL21P89-201ENST00000444021 467 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 OR6K5P-201ENST00000447050 945 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 RPL36AP33-201ENST00000450395 310 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AL353691.1-201ENST00000451332 387 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 RPS4XP10-201ENST00000465034 731 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC114981.1-201ENST00000503897 678 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 HMGB1P28-201ENST00000507778 552 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 SNORA19.3-201ENST00000516165 130 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC034205.1-201ENST00000520621 638 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 ERHP1-201ENST00000523006 310 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC010591.1-201ENST00000603941 649 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AL031176.1-201ENST00000604554 466 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 uc_338.1-201ENST00000612113 180 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AL138478.1-201ENST00000612252 832 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC243773.3-201ENST00000613270 256 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 MLECP1-201ENST00000615893 709 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AL121895.2-201ENST00000619558 447 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC073342.3-201ENST00000624211 193 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms