Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AP000526.1-201ENST00000603308 1388 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 TTC39DP-201ENST00000416781 1688 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AL365396.1-201ENST00000430854 671 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC087441.2-201ENST00000529141 262 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 RNA5SP439-201ENST00000617595 124 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AL391987.6-201ENST00000305671 199 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 U8.10-201ENST00000384260 133 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 Y_RNA.630-201ENST00000411370 108 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC074367.1-201ENST00000438685 1125 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC003989.2-201ENST00000440224 169 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 OR10AB1P-201ENST00000609613 938 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC108479.2-201ENST00000617314 601 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 MIR4660-201ENST00000583549 74 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC004492.1-201ENST00000607036 742 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 POLHP1-201ENST00000411806 470 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 ACTG1P13-201ENST00000486987 1043 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 RPL38P4-201ENST00000502376 214 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC010872.1-201ENST00000624225 675 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC010615.1-201ENST00000594254 1764 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 Y_RNA.18-201ENST00000362461 102 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 MIR583-201ENST00000384846 75 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 RPS7P5-201ENST00000441482 581 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 SRIP1-201ENST00000489235 288 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 uc_338.5-201ENST00000611839 155 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC098657.3-201ENST00000620434 263 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC1□□□□□ -2.25
MACF1Q9UPN3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
MACF1Q9UPN3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1□□□□□ -2.25
MACF1Q9UPN3 SNORD74.4-201ENST00000364129 80 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 RNU4-62P-201ENST00000410125 130 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 AC008526.1-201ENST00000509149 338 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1□□□□□ -2.25
MACF1Q9UPN3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1□□□□□ -2.25
MACF1Q9UPN3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1□□□□□ -2.25
MACF1Q9UPN3 DDX43P2-201ENST00000604753 1354 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 RNU2-17P-201ENST00000410290 190 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 SDCBPP3-201ENST00000419629 891 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1□□□□□ -2.25
MACF1Q9UPN3 RPS15AP1-201ENST00000457423 391 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 AC114801.2-201ENST00000503825 781 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1□□□□□ -2.25
MACF1Q9UPN3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1□□□□□ -2.25
MACF1Q9UPN3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1□□□□□ -2.25
MACF1Q9UPN3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1□□□□□ -2.25
MACF1Q9UPN3 AC010378.1-201ENST00000619270 362 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC1□□□□□ -2.25
MACF1Q9UPN3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC1□□□□□ -2.25
MACF1Q9UPN3 Y_RNA.25-201ENST00000362528 102 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1□□□□□ -2.25
MACF1Q9UPN3 AC021146.3-201ENST00000511911 260 ntBASIC1□□□□□ -2.25
MACF1Q9UPN3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC1□□□□□ -2.25
MACF1Q9UPN3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms