Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 MIR4637-201ENST00000582405 84 ntBASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 RSL24D1P11-201ENST00000591045 491 ntBASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 AL049634.3-201ENST00000604968 457 ntBASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 RN7SKP299-201ENST00000606679 301 ntBASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 AL031775.1-201ENST00000607014 887 ntBASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 AC068722.2-201ENST00000618734 544 ntBASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 AC006927.3-201ENST00000638789 384 ntBASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HDAC9Q9UKV0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 RNA5SP167-201ENST00000365461 116 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 SNORA51.6-201ENST00000384151 125 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC096664.2-201ENST00000411843 406 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 ZYG11AP1-201ENST00000430329 837 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AL353706.1-201ENST00000436728 494 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC068724.1-201ENST00000487100 792 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 UBE2CP3-201ENST00000502715 450 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC010424.1-201ENST00000506336 297 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 RN7SKP13-201ENST00000515933 244 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 Y_RNA.695-201ENST00000516715 107 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 IGHV3-32-201ENST00000519182 355 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC090616.5-202ENST00000582111 297 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC073544.2-201ENST00000601155 540 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC064801.1-201ENST00000612025 407 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 HULC.1-201ENST00000612720 240 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 AC098679.4-201ENST00000624241 654 ntBASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC9Q9UKV0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HDAC9Q9UKV0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HDAC9Q9UKV0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 RNU6-462P-201ENST00000362659 105 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 U3.4-201ENST00000363352 213 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 Y_RNA.194-201ENST00000363985 102 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 RNU6-723P-201ENST00000383973 107 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 U1.1-201ENST00000384101 164 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 Y_RNA.500-201ENST00000384466 111 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 ARF4P3-201ENST00000397387 509 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 HMGB1P17-201ENST00000403495 628 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL138880.1-201ENST00000405824 642 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL603766.1-201ENST00000407763 664 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL023807.1-201ENST00000407932 359 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 SYF2P2-201ENST00000417620 583 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL035423.1-201ENST00000420331 213 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 MTND4P6-201ENST00000438297 472 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AP000936.2-201ENST00000447151 681 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 RPL36AP33-201ENST00000450395 310 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL133162.1-201ENST00000463228 453 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 RPL32P34-201ENST00000486380 400 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AC078918.1-201ENST00000498515 228 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AC104986.1-201ENST00000517978 436 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 MYL12AP1-201ENST00000518490 515 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 OR6C7P-201ENST00000547875 934 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 GTF2IP22-201ENST00000554443 182 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AC012414.6-201ENST00000568241 401 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms