Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 HIGD1AP10-201ENST00000527837 282 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 MTND2P26-201ENST00000528255 1029 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AC133794.1-201ENST00000602731 914 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AC103881.1-201ENST00000603476 538 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AC092593.1-201ENST00000515413 1815 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 SGO1P1-201ENST00000603525 1447 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 MTND5P3-201ENST00000438536 1800 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 MTCO2P31-201ENST00000402702 684 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AL139281.1-201ENST00000422120 335 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 FO393414.1-201ENST00000428697 1184 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 OR2B8P-201ENST00000432841 938 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC026414.1-201ENST00000504046 698 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 MTCO1P30-201ENST00000515244 580 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 RNU6-416P-201ENST00000516265 103 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AP004242.1-201ENST00000533701 349 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC006518.2-201ENST00000542513 940 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AL157394.1-201ENST00000562983 1224 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC083760.1-201ENST00000589621 670 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC008687.2-201ENST00000597865 520 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC013468.1-201ENST00000608680 598 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AP004247.3-201ENST00000608682 624 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 VN1R74P-201ENST00000613259 503 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC022079.2-201ENST00000619739 566 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AL138955.1-201ENST00000622881 1040 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 SNORA50A-202ENST00000629536 136 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AL356118.1-201ENST00000635272 1078 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPC1L1Q9UHC9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 MIR181B1-201ENST00000385240 110 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 MIR16-1-201ENST00000385271 89 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AC069282.1-201ENST00000411911 526 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 OR51A3P-201ENST00000413596 924 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 SDCBPP3-201ENST00000419629 891 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 CKS1BP5-201ENST00000434172 273 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 RPS7P2-201ENST00000435134 607 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 RPS24P13-201ENST00000442520 397 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 HMGN2P21-201ENST00000447764 270 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 RPL21P18-201ENST00000469899 480 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AC090525.1-201ENST00000479116 478 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 NAMPTP2-201ENST00000505629 1115 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AC010486.1-201ENST00000511793 424 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 RNA5SP367-201ENST00000516557 118 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AC103783.1-201ENST00000520506 373 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 OR8K4P-201ENST00000534608 872 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AC007954.1-201ENST00000554198 494 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AL355836.1-201ENST00000555951 870 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 MIR3605-201ENST00000583214 100 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 VN1R87P-201ENST00000596706 487 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AC096947.1-201ENST00000603233 470 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AC005156.1-201ENST00000613371 573 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 AC009039.2-201ENST00000624524 529 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 MTND4P8-201ENST00000514997 1362 ntBASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPC1L1Q9UHC9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPC1L1Q9UHC9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
NPC1L1Q9UHC9 RNU5B-1-201ENST00000363286 116 ntBASIC3.78□□□□□ -1.8
NPC1L1Q9UHC9 RNU5B-4P-201ENST00000363508 111 ntBASIC3.78□□□□□ -1.8
NPC1L1Q9UHC9 RNU6-444P-201ENST00000383988 108 ntBASIC3.78□□□□□ -1.8
NPC1L1Q9UHC9 AL360182.1-201ENST00000397433 468 ntBASIC3.78□□□□□ -1.8
NPC1L1Q9UHC9 AL139095.1-201ENST00000404326 391 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms