Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AL365440.1-201ENST00000436135 2167 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 MTCO1P9-201ENST00000505577 1534 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 FRG1BP-201ENST00000278882 761 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 RNU4-21P-201ENST00000362802 126 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 U3.4-201ENST00000363352 213 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 SNORD35B-201ENST00000363660 87 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 RNA5SP479-201ENST00000364858 117 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 RNU6-359P-201ENST00000365466 108 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 RPL21P65-201ENST00000406094 466 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AL359704.1-201ENST00000411586 781 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AL356095.1-201ENST00000417217 199 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 CYCSP46-201ENST00000423569 204 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 OR5BE1P-201ENST00000425977 939 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 THAP5P1-201ENST00000439089 262 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 TRIM60P18-201ENST00000441518 828 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 RPS4XP4-201ENST00000443195 763 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC104308.1-201ENST00000454621 333 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 SNRPGP9-201ENST00000456025 225 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 RPL38P1-201ENST00000460914 211 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 RPL29P14-201ENST00000495837 428 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC004062.1-201ENST00000509926 645 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC109635.4-202ENST00000531666 412 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 MIR548AB-201ENST00000584917 84 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC083760.1-201ENST00000589621 670 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 RNU4-89P-201ENST00000607443 133 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AL158063.1-201ENST00000615349 536 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 MIR7151-201ENST00000617477 60 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC002550.2-201ENST00000621246 394 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AC112484.5-201ENST00000624189 228 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 AP003399.1-201ENST00000637534 361 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 OR5BE1P-202ENST00000641168 1176 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 CCT4P2-201ENST00000233836 1548 ntBASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
HCN3Q9P1Z3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 PNPT1P2-201ENST00000456768 2050 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 RLIMP1-201ENST00000339626 1680 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 MIR372-201ENST00000362225 67 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 RNU6-600P-201ENST00000362524 99 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 RNU6-114P-201ENST00000384704 105 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 U3.20-201ENST00000390909 217 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 HSPE1P12-201ENST00000412576 301 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 RPL17P12-201ENST00000413391 526 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 BEND7P1-201ENST00000422058 457 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC079780.1-201ENST00000428259 207 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 OR4K11P-201ENST00000431829 904 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC096638.2-201ENST00000434965 711 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 RPL7P28-201ENST00000437739 740 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC108734.1-201ENST00000439549 399 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 RPL36AP13-201ENST00000457490 317 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 Y_RNA.695-201ENST00000516715 107 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 RNU6-528P-201ENST00000516926 100 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms