Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RN7SL75P-201ENST00000461926 281 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RPL37P6-202ENST00000464216 403 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 SNRPGP3-201ENST00000469405 227 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 VPS26AP1-201ENST00000483197 979 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RNU6-1225P-201ENST00000516336 65 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RNU6-759P-201ENST00000516740 103 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RNA5SP135-201ENST00000517019 125 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RN7SKP234-201ENST00000517173 224 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 HIGD1AP6-201ENST00000521833 279 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AF279873.1-201ENST00000523393 313 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AP001317.1-201ENST00000531194 960 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC008687.2-201ENST00000597865 520 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 VN1R85P-201ENST00000601587 426 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC068137.4-201ENST00000638485 296 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AL353746.1-201ENST00000566293 6881 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 XPOTP1-201ENST00000443317 2398 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 RNU6-621P-201ENST00000364752 109 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AL139098.1-201ENST00000407291 389 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC068533.2-201ENST00000411872 306 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 MRPS36P1-201ENST00000421291 307 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AL139421.1-201ENST00000423010 169 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 ATP5JP1-201ENST00000431631 322 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC244505.4-201ENST00000434905 287 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 YWHAZP7-201ENST00000436906 631 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 SSXP5-201ENST00000443473 287 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 RPS27AP8-201ENST00000452665 445 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 NF1P3-201ENST00000457709 450 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 SNORD108-201ENST00000459332 71 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC025518.1-201ENST00000479856 347 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 RPL21P103-201ENST00000479921 488 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC108734.3-201ENST00000481241 1165 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC005726.1-201ENST00000494679 427 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 WBP1LP4-201ENST00000505043 344 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 RN7SKP96-201ENST00000516948 297 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC074029.1-201ENST00000552531 1044 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC055876.1-202ENST00000567053 138 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AL031281.1-201ENST00000604049 488 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AP003973.1-201ENST00000604639 691 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC106791.2-201ENST00000604680 391 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC079248.2-201ENST00000623779 326 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC116618.1-201ENST00000634617 774 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AC068620.4-201ENST00000636730 1182 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF2Q9HAU5 AL513185.3-201ENST00000433335 1300 ntBASIC3.94□□□□□ -1.78
UPF2Q9HAU5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 GABPAP-201ENST00000419271 1356 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 RNU5D-1-201ENST00000363299 116 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 SNORD17-201ENST00000390930 237 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AL445189.1-201ENST00000405722 338 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 RN7SKP58-201ENST00000411010 305 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 AL365203.2-201ENST00000423444 196 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 DPRXP1-201ENST00000426312 460 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 UBE2V1P1-201ENST00000430836 445 ntBASIC3.93□□□□□ -1.78
UPF2Q9HAU5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
UPF2Q9HAU5 ATP5C1P1-201ENST00000441945 895 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms