Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RNU6-968P-201ENST00000384076 107 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 AC007365.2-201ENST00000428806 458 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 AC063943.2-201ENST00000495697 534 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 RNU1-86P-201ENST00000516108 154 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 RNU1-107P-201ENST00000516617 154 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 RPL29P33-201ENST00000587474 316 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 AC068831.7-201ENST00000616954 363 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 AC012254.3-201ENST00000591183 2117 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 DDX10P1-201ENST00000448545 1933 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 CUL1P1-201ENST00000509510 2425 ntBASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 EEF1A1P24-201ENST00000451469 1378 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 SNORA40.5-201ENST00000391061 128 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AC108479.1-201ENST00000431142 427 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AC073587.1-201ENST00000447093 876 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AL356981.1-201ENST00000454879 684 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AC146944.3-201ENST00000509969 371 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 RNU6-567P-201ENST00000516746 107 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AC090022.1-201ENST00000546569 311 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AC103996.1-201ENST00000555468 102 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AL390726.5-202ENST00000564800 256 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 MIR6826-201ENST00000617808 98 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 CR381572.2-201ENST00000624852 397 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 LINC01613-201ENST00000561476 2780 ntBASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SCAF1Q9H7N4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AL451142.2-201ENST00000429076 2090 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 PPIAP22-201ENST00000358455 498 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 RNA5SP361-201ENST00000362686 118 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 LCN1P2-201ENST00000372030 223 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 RNU6-225P-201ENST00000384613 103 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 RNU6-578P-201ENST00000390980 103 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 LAP3P1-201ENST00000403648 294 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AL591034.1-201ENST00000407447 340 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AC063979.1-201ENST00000415539 377 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 USP9YP7-201ENST00000436723 430 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 USP9YP32-201ENST00000452432 430 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 RPS5P7-201ENST00000456664 608 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 RN7SL552P-201ENST00000462094 276 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 FXNP1-201ENST00000555153 337 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 SMIM12P1-201ENST00000603004 274 ntBASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
SCAF1Q9H7N4 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SCAF1Q9H7N4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SCAF1Q9H7N4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
SCAF1Q9H7N4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCAF1Q9H7N4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC9.89□□□□□ -0.83
SCAF1Q9H7N4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCAF1Q9H7N4 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCAF1Q9H7N4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
SCAF1Q9H7N4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCAF1Q9H7N4 RNA5SP514-201ENST00000363717 111 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms