Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 RNU4-68P-201ENST00000364314 141 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 RNU6-335P-201ENST00000364563 113 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 RNU6-413P-201ENST00000384115 107 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 RNU6-906P-201ENST00000384700 70 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 MIR490-201ENST00000384865 128 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 RNU6ATAC-201ENST00000408749 126 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 ELOCP9-201ENST00000418624 239 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 USP9YP24-201ENST00000434374 697 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 USP9YP17-201ENST00000444617 696 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 MTCYBP11-201ENST00000447254 1109 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 UQCRHP3-201ENST00000451503 251 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AC093767.1-201ENST00000504523 156 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AC021146.8-201ENST00000507455 733 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 IGKV2D-19-201ENST00000523346 262 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AP003385.6-201ENST00000531603 374 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 UBE2NP1-201ENST00000545592 458 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 HIGD1AP1-201ENST00000550979 275 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 RPL21P12-201ENST00000559810 515 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AC106785.1-201ENST00000565935 262 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 MIR2682-201ENST00000580305 110 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 ZNF415P1-201ENST00000582279 1166 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AP001269.3-201ENST00000588718 329 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 MTCO2P2-201ENST00000591258 225 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 BNIP3P26-201ENST00000600827 554 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AC011468.4-201ENST00000603942 409 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 IGHV3-29-201ENST00000604817 344 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 U3.45-201ENST00000607547 219 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AC100793.4-201ENST00000613683 429 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AC006386.1-201ENST00000619436 415 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AC039056.2-201ENST00000622261 511 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 CR392039.5-201ENST00000623201 510 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 AP001002.2-201ENST00000625137 386 ntBASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HDHD3Q9BSH5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 MTND5P27-201ENST00000428871 1720 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 Y_RNA.25-201ENST00000362528 102 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 Y_RNA.192-201ENST00000363977 102 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 MT-TC-201ENST00000387405 66 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 SNORA57.1-201ENST00000391227 145 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 RPL31P1-201ENST00000398116 372 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AL590084.1-201ENST00000407885 387 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 MIR1250-201ENST00000408098 113 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 HMGN1P24-201ENST00000412282 298 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 RPS29P4-201ENST00000414733 161 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 SETP5-201ENST00000437270 562 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 MTCO2P20-201ENST00000437339 673 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 RPS12P18-201ENST00000442381 270 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 VN1R10P-201ENST00000447106 875 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC007327.1-201ENST00000447461 264 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC005410.1-202ENST00000460347 485 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC092757.1-201ENST00000467293 467 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 HMGB1P28-201ENST00000507778 552 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC010460.2-201ENST00000509054 677 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 MIR4697-201ENST00000582977 78 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 MTND2P41-201ENST00000637599 773 ntBASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HDHD3Q9BSH5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms