Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC104837.1-201ENST00000444644 1587 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 RNA5SP333-201ENST00000363466 118 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 RNU6-595P-201ENST00000363944 107 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 Y_RNA.237-201ENST00000364439 102 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 RNA5SP334-201ENST00000364825 118 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 MTCYBP2-201ENST00000407745 171 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 CYCSP10-201ENST00000417973 294 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC005077.1-201ENST00000449226 375 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 U8.21-201ENST00000459536 136 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 RN7SL643P-201ENST00000471845 291 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 RN7SL369P-201ENST00000477138 299 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 Y_RNA.703-201ENST00000516846 111 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 RPL23AP87-202ENST00000573039 466 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 MIR3976-201ENST00000606807 139 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 MIR6793-201ENST00000612376 63 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 AL136228.1-201ENST00000622221 319 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 AP000560.1-201ENST00000624150 1937 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 MAPK10-338ENST00000641647 3362 ntBASIC6.32□□□□□ -1.4
PHOX2BQ99453 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
PHOX2BQ99453 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PHOX2BQ99453 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 AC007938.2-201ENST00000604666 2634 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 MTND5P9-201ENST00000503854 1755 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 AC022905.1-201ENST00000503430 3048 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 AL161901.1-201ENST00000624954 3425 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 SNORA21-201ENST00000362423 132 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 RNU6-545P-201ENST00000362681 104 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 Y_RNA.65-201ENST00000362846 100 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 Y_RNA.274-201ENST00000364714 101 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 Y_RNA.533-201ENST00000384596 114 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 RNU6-146P-201ENST00000384602 108 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 MIR578-201ENST00000384828 96 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 RNA5SP36-201ENST00000410197 133 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 RNU6-121P-201ENST00000410525 99 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 Y_RNA.793-201ENST00000411222 111 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 AC063979.1-201ENST00000415539 377 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 AL359092.1-201ENST00000417156 265 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 AC006946.1-201ENST00000429106 328 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 AC091390.1-201ENST00000433904 331 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 RPS12P17-201ENST00000438591 377 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 RPL30P10-201ENST00000488148 337 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 RNU6-941P-201ENST00000516346 108 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 RNU6-1212P-201ENST00000517023 104 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 MIR5696-201ENST00000578474 85 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 MIR4505-201ENST00000582238 73 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 RNF138P2-201ENST00000603490 592 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 RPL12P48-201ENST00000605620 304 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 MIR378J-201ENST00000611988 109 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 AC100827.5-201ENST00000615883 426 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 AC132825.6-201ENST00000638861 357 ntBASIC6.31□□□□□ -1.4
PHOX2BQ99453 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PHOX2BQ99453 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PHOX2BQ99453 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms