Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 RNU5F-6P-201ENST00000362979 116 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 RNA5SP175-201ENST00000364275 119 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 RNU6-114P-201ENST00000384704 105 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AL645927.1-201ENST00000396783 406 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 EI24P2-201ENST00000397776 1076 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 RNU2-43P-201ENST00000410306 190 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 DUTP6-201ENST00000425573 462 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AL445669.1-201ENST00000426743 755 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC109583.1-201ENST00000432156 268 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC010468.1-201ENST00000461022 817 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AL024509.2-201ENST00000493462 493 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC026784.1-201ENST00000507986 352 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 NDUFB5P1-201ENST00000508134 564 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 OR5BM1P-201ENST00000512021 366 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC026801.2-201ENST00000515352 425 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 RN7SKP83-201ENST00000516512 178 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC025881.1-201ENST00000518851 512 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AP003497.1-201ENST00000528472 562 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC091489.2-201ENST00000566263 604 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 FAM60BP-201ENST00000578364 658 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC060771.1-201ENST00000582031 164 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 Z94722.1-201ENST00000604328 474 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AL022099.1-201ENST00000604551 712 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 BCRP9-201ENST00000605312 388 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC092125.1-201ENST00000562568 1995 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC009902.3-201ENST00000606235 2172 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RNU6-50P-201ENST00000362356 103 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 Y_RNA.97-201ENST00000363094 102 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 MIR135A2-201ENST00000384854 100 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RNU6-882P-201ENST00000391025 103 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 HLFP1-201ENST00000402375 499 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AL391417.1-201ENST00000404100 426 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RN7SKP106-201ENST00000410832 272 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RPL17P12-201ENST00000413391 526 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC104837.2-201ENST00000427236 424 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 LARP1BP3-201ENST00000437229 869 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 THAP5P1-201ENST00000439089 262 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RPS17P13-201ENST00000448974 407 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC009961.3-201ENST00000449832 765 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RPS27AP8-201ENST00000452665 445 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 SBDSP1-204ENST00000453858 737 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RPL23AP31-201ENST00000456160 467 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RPL36AP13-201ENST00000457490 317 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RPS3AP41-201ENST00000462701 778 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 VN1R17P-201ENST00000472048 1090 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC083982.1-201ENST00000485679 344 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 OR7H2P-201ENST00000513483 306 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RN7SKP244-201ENST00000516513 307 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RN7SKP60-201ENST00000516985 239 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 BRD9P1-201ENST00000529855 560 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC105233.3-201ENST00000531125 744 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 SNRPGP16-201ENST00000533275 226 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AL356057.1-201ENST00000533798 831 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC008507.1-201ENST00000587506 734 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC083760.1-201ENST00000589621 670 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AL022161.1-201ENST00000604390 213 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AL031775.1-201ENST00000607014 887 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 MIR6130-201ENST00000619419 109 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC009268.2-201ENST00000621925 457 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 AC048347.1-201ENST00000624621 427 ntBASIC3.81□□□□□ -1.8
NR1H4Q96RI1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NR1H4Q96RI1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AP002001.2-201ENST00000529025 1469 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms