Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC093677.1-201ENST00000514414 678 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 RNA5SP208-201ENST00000516156 78 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 RNU6-150P-201ENST00000516237 95 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 RAB9BP1-201ENST00000519581 626 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AL845331.3-202ENST00000562856 261 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC145350.1-201ENST00000567426 208 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC008088.1-201ENST00000580993 280 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC022916.3-201ENST00000592961 742 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 KLKP1-201ENST00000595979 403 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AL451086.1-201ENST00000605596 223 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 MLECP1-201ENST00000615893 709 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC026422.1-201ENST00000623961 452 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 RLIMP1-201ENST00000339626 1680 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 RNU6-28P-201ENST00000362378 107 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 SNORD116-2-201ENST00000384274 95 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 SNORD116-6-201ENST00000384711 96 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 RSL24D1P4-201ENST00000400938 484 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 MIR937-201ENST00000401271 86 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 RPL21P65-201ENST00000406094 466 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC107081.1-201ENST00000414975 361 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL137014.1-201ENST00000420490 1226 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC079780.1-201ENST00000428259 207 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 ZYG11AP1-201ENST00000430329 837 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL590103.1-201ENST00000434488 307 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 MTCYBP45-201ENST00000435243 565 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 MTND5P14-201ENST00000441481 1267 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 MRPS31P2-201ENST00000451581 518 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 HMGB1P15-201ENST00000453854 435 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 BX322784.1-201ENST00000455793 1077 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC006463.2-201ENST00000473326 348 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC084198.1-201ENST00000477747 402 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 RPS3AP50-201ENST00000487064 803 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 RPS4XP15-201ENST00000489210 795 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC082651.2-201ENST00000496833 166 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC004062.1-201ENST00000509926 645 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 CR383656.7-201ENST00000548164 174 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC090615.1-201ENST00000577519 154 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL353997.4-201ENST00000586196 166 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL596327.1-201ENST00000603629 213 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL022161.1-201ENST00000604390 213 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL163642.2-201ENST00000604722 1019 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL137849.1-201ENST00000604767 169 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 RNU4-89P-201ENST00000607443 133 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AL391497.1-201ENST00000608671 547 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 BX323046.1-201ENST00000610145 535 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 TUSC7.1-201ENST00000610969 165 ntBASIC3.31□□□□□ -1.88
RFT1Q96AA3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFT1Q96AA3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.31□□□□□ -1.88
RFT1Q96AA3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFT1Q96AA3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFT1Q96AA3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFT1Q96AA3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFT1Q96AA3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.3□□□□□ -1.88
RFT1Q96AA3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms