Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC135507.2-201ENST00000612443 309 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 AL442067.2-201ENST00000614033 363 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
BRF1Q92994 AL356585.4-201ENST00000623078 1229 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRF1Q92994 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRF1Q92994 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.3□□□□□ -1.56
BRF1Q92994 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
BRF1Q92994 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
BRF1Q92994 AP001273.1-201ENST00000624493 3152 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 PHKBP1-201ENST00000450951 1951 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
BRF1Q92994 RNU6-1243P-201ENST00000364028 107 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 SNORD113.2-201ENST00000364166 89 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 RNY1P12-201ENST00000364251 105 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 RNVU1-6-201ENST00000364688 164 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 SNORD81.2-201ENST00000365153 76 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRF1Q92994 Y_RNA.460-201ENST00000384255 102 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRF1Q92994 SSXP10-201ENST00000402595 565 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 RNU6-603P-201ENST00000411403 107 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 AC069218.2-201ENST00000411665 344 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.3□□□□□ -1.56
BRF1Q92994 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.3□□□□□ -1.56
BRF1Q92994 PDCL2P1-201ENST00000419302 352 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 AC012065.2-201ENST00000421295 375 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.3□□□□□ -1.56
BRF1Q92994 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.3□□□□□ -1.56
BRF1Q92994 SCARNA15.1-201ENST00000516384 125 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.3□□□□□ -1.56
BRF1Q92994 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.3□□□□□ -1.56
BRF1Q92994 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.3□□□□□ -1.56
BRF1Q92994 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.3□□□□□ -1.56
BRF1Q92994 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.3□□□□□ -1.56
BRF1Q92994 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.3□□□□□ -1.56
BRF1Q92994 AC010201.1-201ENST00000605051 540 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.3□□□□□ -1.56
BRF1Q92994 MIR7703-201ENST00000620784 77 ntBASIC5.3□□□□□ -1.56
BRF1Q92994 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.3□□□□□ -1.56
BRF1Q92994 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.3□□□□□ -1.56
BRF1Q92994 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
BRF1Q92994 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF1Q92994 ELL2P4-201ENST00000446870 1376 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.29□□□□□ -1.56
BRF1Q92994 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.29□□□□□ -1.56
BRF1Q92994 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF1Q92994 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.29□□□□□ -1.56
BRF1Q92994 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BRF1Q92994 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BRF1Q92994 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
BRF1Q92994 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF1Q92994 Y_RNA.381-201ENST00000365666 102 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 FAT1P1-201ENST00000406588 507 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 RNU2-50P-201ENST00000410494 143 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 VDAC1P9-201ENST00000412766 841 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF1Q92994 AL807761.1-201ENST00000417622 171 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AC006548.1-201ENST00000427470 102 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF1Q92994 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
BRF1Q92994 AC007677.1-201ENST00000445757 515 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 RPL23AP43-201ENST00000446445 471 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AC005008.1-201ENST00000456151 612 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.29□□□□□ -1.56
BRF1Q92994 AC093278.1-201ENST00000494700 600 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AC231760.1-201ENST00000498002 260 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 PCBP2P3-201ENST00000509726 843 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 RNU6-1153P-201ENST00000516760 105 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF1Q92994 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF1Q92994 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.29□□□□□ -1.56
BRF1Q92994 AL390726.5-202ENST00000564800 256 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF1Q92994 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.29□□□□□ -1.56
BRF1Q92994 AC020634.1-201ENST00000608701 549 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 BX323046.1-201ENST00000610145 535 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AL132765.2-201ENST00000610812 351 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 MIR6780A-201ENST00000615089 68 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 AL596245.1-201ENST00000618994 362 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 CR381572.1-201ENST00000625098 102 ntBASIC5.29□□□□□ -1.56
BRF1Q92994 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF1Q92994 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.29□□□□□ -1.56
BRF1Q92994 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
BRF1Q92994 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF1Q92994 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BRF1Q92994 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF1Q92994 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF1Q92994 AL122126.1-201ENST00000546905 1318 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF1Q92994 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
BRF1Q92994 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF1Q92994 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF1Q92994 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF1Q92994 RNA5SP372-201ENST00000390836 115 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 RPL7P60-201ENST00000397636 735 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 SDHCP2-201ENST00000398565 501 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AL354719.1-201ENST00000406535 843 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 RPL31P52-201ENST00000407532 367 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms