Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 HMGB1P41-201ENST00000520234 440 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 SERPINE4P-201ENST00000554978 281 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC022884.3-201ENST00000579571 248 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC005014.3-201ENST00000605985 190 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC092574.1-201ENST00000609771 420 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC011472.4-201ENST00000615848 491 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHROOM3Q8TF72 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SHROOM3Q8TF72 AC097714.1-201ENST00000511272 1647 ntBASIC2.59□□□□□ -1.99
SHROOM3Q8TF72 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHROOM3Q8TF72 Y_RNA.140-201ENST00000363474 103 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SHROOM3Q8TF72 MIR92A2-201ENST00000385299 75 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 SNORA40.4-201ENST00000390971 128 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 ARL2BPP3-201ENST00000421226 480 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.59□□□□□ -2
SHROOM3Q8TF72 HMGB1P26-201ENST00000452520 628 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.59□□□□□ -2
SHROOM3Q8TF72 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.59□□□□□ -2
SHROOM3Q8TF72 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.59□□□□□ -2
SHROOM3Q8TF72 SNORA31.15-201ENST00000516771 132 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 RNU6-467P-201ENST00000517027 110 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 IGHV3-76-201ENST00000522465 295 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.59□□□□□ -2
SHROOM3Q8TF72 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.59□□□□□ -2
SHROOM3Q8TF72 AC091488.1-201ENST00000604239 660 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 AC091564.4-201ENST00000533934 2194 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 AC069528.2-201ENST00000624849 1991 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 RLIMP2-201ENST00000427891 1563 ntBASIC2.59□□□□□ -2
SHROOM3Q8TF72 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.59□□□□□ -2
SHROOM3Q8TF72 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.59□□□□□ -2
SHROOM3Q8TF72 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHROOM3Q8TF72 RNU6-244P-201ENST00000391028 104 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 RPS12P2-201ENST00000439728 269 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC133963.2-201ENST00000513686 578 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC103833.1-201ENST00000517442 172 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHROOM3Q8TF72 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC084035.1-201ENST00000634543 607 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHROOM3Q8TF72 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHROOM3Q8TF72 RNU6-253P-201ENST00000384730 105 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 AL162578.1-201ENST00000406202 378 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 RNU2-17P-201ENST00000410290 190 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 RPS24P8-201ENST00000431490 402 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 FCF1P1-201ENST00000432690 571 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 AL049830.2-201ENST00000480072 201 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 RPL23AP44-201ENST00000482216 473 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 OR9N1P-202ENST00000494289 481 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC112503.2-201ENST00000609005 552 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC000123.2-201ENST00000623124 461 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.58□□□□□ -2
SHROOM3Q8TF72 AC015726.3-201ENST00000624501 418 ntBASIC2.58□□□□□ -2
SHROOM3Q8TF72 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
SHROOM3Q8TF72 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SHROOM3Q8TF72 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SHROOM3Q8TF72 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SHROOM3Q8TF72 AL136520.1-201ENST00000600311 1322 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 MAPK10-362ENST00000641864 4484 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SHROOM3Q8TF72 Y_RNA.466-201ENST00000384294 113 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 HMGB1P13-201ENST00000406019 642 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 AC073464.3-201ENST00000422564 712 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 MTCO1P43-201ENST00000431831 488 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.57□□□□□ -2
SHROOM3Q8TF72 RN7SL499P-201ENST00000481141 276 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 CKS1BP2-201ENST00000497342 240 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.57□□□□□ -2
SHROOM3Q8TF72 HAUS1P1-201ENST00000505275 832 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.57□□□□□ -2
SHROOM3Q8TF72 AC068714.1-201ENST00000559623 800 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.57□□□□□ -2
SHROOM3Q8TF72 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.57□□□□□ -2
SHROOM3Q8TF72 AC061975.8-201ENST00000587058 721 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 AC079610.2-201ENST00000604818 690 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 AL355802.4-201ENST00000607635 548 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.57□□□□□ -2
SHROOM3Q8TF72 AP000943.4-201ENST00000622912 357 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 AC026634.1-201ENST00000634369 198 ntBASIC2.57□□□□□ -2
SHROOM3Q8TF72 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.57□□□□□ -2
SHROOM3Q8TF72 MTCO1P4-201ENST00000520516 1409 ntBASIC2.56□□□□□ -2
SHROOM3Q8TF72 FRG1BP-201ENST00000278882 761 ntBASIC2.56□□□□□ -2
SHROOM3Q8TF72 METTL21EP-201ENST00000298105 713 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms