Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MTCO1P30-201ENST00000515244 580 ntBASIC1.6□□□□□ -2.15
ALMS1Q8TCU4 AC025881.1-201ENST00000518851 512 ntBASIC1.6□□□□□ -2.15
ALMS1Q8TCU4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.6□□□□□ -2.15
ALMS1Q8TCU4 AC131902.3-201ENST00000611767 581 ntBASIC1.6□□□□□ -2.15
ALMS1Q8TCU4 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.6□□□□□ -2.15
ALMS1Q8TCU4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
ALMS1Q8TCU4 RNA5SP129-201ENST00000410276 118 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 LINC00888-204ENST00000487386 421 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 AL139811.1-201ENST00000424779 2299 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 SNORA25.9-201ENST00000365087 128 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 AC108667.1-201ENST00000428618 249 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 MUPP-201ENST00000438111 566 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 AL592437.1-201ENST00000443781 492 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 ST13P20-201ENST00000447996 1065 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 HMGB3P21-201ENST00000452483 547 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 RPL23AP45-201ENST00000476406 468 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 ELOCP31-201ENST00000540463 467 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 RPL23AP84-201ENST00000571193 464 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 MIR4512-201ENST00000583257 77 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 MIR4448-201ENST00000584360 86 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 AL359198.2-201ENST00000611836 194 ntBASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ALMS1Q8TCU4 HIGD1AP11-201ENST00000438361 280 ntBASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 RPL39P40-201ENST00000445481 146 ntBASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 AC089999.1-201ENST00000460336 374 ntBASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 AC108729.3-201ENST00000513484 108 ntBASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 AC002076.2-201ENST00000617362 122 ntBASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 AL356266.1-201ENST00000623311 483 ntBASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
ALMS1Q8TCU4 UBE2V2P1-201ENST00000434717 398 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC124916.1-201ENST00000444020 547 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 RN7SKP140-201ENST00000411196 284 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 HMGN2P35-201ENST00000412164 270 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 RSL24D1P2-201ENST00000445584 366 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC107222.1-201ENST00000510899 637 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AL355578.1-201ENST00000607405 1328 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 METTL21EP-201ENST00000298105 713 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AL139156.1-201ENST00000412785 841 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC117522.2-201ENST00000510049 657 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 GNAI2P1-201ENST00000541815 315 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC018754.1-201ENST00000607486 925 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC005156.1-201ENST00000613371 573 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 FRG1DP-201ENST00000635586 771 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 PWAR6-201ENST00000552334 4618 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 RPS26P21-201ENST00000475397 348 ntBASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.58□□□□□ -2.16
ALMS1Q8TCU4 AL359893.1-201ENST00000447628 1580 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 RNU6-321P-201ENST00000410912 106 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 GSTA11P-201ENST00000452866 669 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 AC104986.1-201ENST00000517978 436 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 AC011611.5-201ENST00000552477 578 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 OR4K7P-201ENST00000580232 945 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 AL512283.1-201ENST00000606756 1384 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 MIR499A-201ENST00000384903 122 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 AL606490.7-201ENST00000433136 191 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 AC244505.4-201ENST00000434905 287 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 SSXP5-201ENST00000443473 287 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 COX6CP2-201ENST00000444980 225 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 AC092754.2-201ENST00000463506 460 ntBASIC1.57□□□□□ -2.16
ALMS1Q8TCU4 SNORA9.3-201ENST00000516383 129 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms