Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC010378.1-201ENST00000619270 362 ntBASIC3.4□□□□□ -1.86
CFAP43Q8NDM7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CFAP43Q8NDM7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CFAP43Q8NDM7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CFAP43Q8NDM7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CFAP43Q8NDM7 RNU1-51P-201ENST00000365345 176 ntBASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 AC093775.1-201ENST00000624154 1868 ntBASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 ARF4P2-201ENST00000430209 526 ntBASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 AC068781.1-201ENST00000488231 618 ntBASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFAP43Q8NDM7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 SNORA11.4-201ENST00000408823 129 ntBASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 RPL23AP62-201ENST00000463396 453 ntBASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 AC007536.1-201ENST00000533382 349 ntBASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 AC126177.3-201ENST00000551839 688 ntBASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 AC010297.1-201ENST00000623948 149 ntBASIC3.38□□□□□ -1.87
CFAP43Q8NDM7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 SNORA79B-201ENST00000410557 148 ntBASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 MIR3670-2-201ENST00000582974 65 ntBASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 MIR3670-1-201ENST00000584160 65 ntBASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 MIR3670-3-201ENST00000584855 65 ntBASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 VN1R80P-201ENST00000597126 338 ntBASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 AC245517.5-201ENST00000611529 162 ntBASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 MIR3670-4-201ENST00000612260 65 ntBASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 OR1S1-201ENST00000624470 978 ntBASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CFAP43Q8NDM7 MIR378A-201ENST00000362177 66 ntBASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 RPS26P30-201ENST00000443431 335 ntBASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 AL035551.1-201ENST00000446931 348 ntBASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 AC099778.2-201ENST00000610904 211 ntBASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 PNPT1P2-201ENST00000456768 2050 ntBASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 CYCSP49-201ENST00000420810 319 ntBASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 AC004866.2-201ENST00000438285 481 ntBASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 HIGD1AP10-201ENST00000527837 282 ntBASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 AL359821.1-201ENST00000605519 182 ntBASIC3.36□□□□□ -1.87
CFAP43Q8NDM7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AP005901.5-201ENST00000545779 1796 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC092447.7-201ENST00000422212 1621 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 SNORD6-201ENST00000365444 73 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 FGF7P8-201ENST00000402994 292 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 RNU6-1140P-201ENST00000410517 106 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 LUZP4P1-201ENST00000415420 344 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC008571.1-201ENST00000467232 300 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC108078.2-201ENST00000510750 236 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC013562.2-201ENST00000611632 603 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC016542.2-201ENST00000624201 619 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 CDC27P2-201ENST00000425026 1922 ntBASIC3.35□□□□□ -1.87
CFAP43Q8NDM7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 MTCO1P42-201ENST00000457379 726 ntBASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 RNU6-826P-201ENST00000516827 104 ntBASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 RNA5SP480-201ENST00000516840 109 ntBASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 AL451074.6-201ENST00000608512 729 ntBASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
CFAP43Q8NDM7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms