Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AC104308.1-201ENST00000454621 333 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AC105914.1-201ENST00000511798 226 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 IGJP1-201ENST00000522682 475 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AL033523.1-201ENST00000605153 153 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AC135507.2-201ENST00000612443 309 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AL110115.1-201ENST00000614396 364 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 Z99129.2-201ENST00000619967 314 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AL137790.1-201ENST00000634283 177 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 API5P2-201ENST00000397055 1498 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC092447.7-201ENST00000422212 1621 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 RPL9P7-201ENST00000330965 580 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 RNU6-821P-201ENST00000390995 107 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 RNU1-101P-201ENST00000391171 127 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 YPEL5P1-201ENST00000419731 367 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 RPL7P46-201ENST00000425129 740 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 RPP40P1-201ENST00000426762 456 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AL929288.2-201ENST00000446368 407 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC111000.2-201ENST00000507775 550 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC091826.1-201ENST00000514065 313 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 RNA5SP76-201ENST00000516277 87 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 RN7SKP282-201ENST00000516824 299 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 RNU6-711P-201ENST00000517255 106 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC124293.1-201ENST00000530034 493 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 HPRT1P3-201ENST00000539521 576 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 LSM6P2-201ENST00000552208 177 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC106734.1-201ENST00000568646 663 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 SNORD84-203ENST00000584275 78 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 XIAPP1-201ENST00000603162 600 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 KATNBL1P5-201ENST00000605015 517 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AP004247.3-201ENST00000608682 624 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC073968.1-201ENST00000618594 637 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 MTND2P41-201ENST00000637599 773 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 AC132825.7-201ENST00000638744 335 ntBASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
ZIC4Q8N9L1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 AC009487.2-201ENST00000420969 6821 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 RNU6-989P-201ENST00000362756 107 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 RNU6-921P-201ENST00000384361 107 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 RPS3AP26-201ENST00000398259 784 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 AC096664.2-201ENST00000411843 406 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 AL645937.1-202ENST00000421799 937 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 AL009174.1-201ENST00000426577 416 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 SNRPEP4-201ENST00000435815 279 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 AC107083.1-201ENST00000439643 279 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 COX6CP2-201ENST00000444980 225 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 RPL21P8-201ENST00000465083 535 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 SNORD59.2-201ENST00000516873 68 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.49□□□□□ -2.01
ZIC4Q8N9L1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms