Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.68□□□□□ -1.5
USP48Q86UV5 RNU6-358P-201ENST00000516564 75 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.68□□□□□ -1.5
USP48Q86UV5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.68□□□□□ -1.5
USP48Q86UV5 AC107918.3-201ENST00000533272 382 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.68□□□□□ -1.5
USP48Q86UV5 MIR3146-201ENST00000580367 79 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.68□□□□□ -1.5
USP48Q86UV5 AC005730.3-201ENST00000583067 366 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 AC008966.2-201ENST00000606157 453 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.68□□□□□ -1.5
USP48Q86UV5 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.68□□□□□ -1.5
USP48Q86UV5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP48Q86UV5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
USP48Q86UV5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP48Q86UV5 MAPK10-304ENST00000641341 3984 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.68□□□□□ -1.5
USP48Q86UV5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
USP48Q86UV5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP48Q86UV5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP48Q86UV5 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP48Q86UV5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP48Q86UV5 RNU1-83P-201ENST00000363426 164 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 Y_RNA.159-201ENST00000363674 87 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 RN7SKP224-201ENST00000364140 325 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 RNU6-876P-201ENST00000391295 104 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.67□□□□□ -1.5
USP48Q86UV5 CYCSP10-201ENST00000417973 294 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 MTATP6P18-201ENST00000417994 673 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 RPS15AP12-201ENST00000419498 388 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 ELOCP4-201ENST00000420090 333 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 E2F6P2-201ENST00000420708 748 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 RPS12P10-201ENST00000427031 377 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 PSMA2P3-201ENST00000429685 675 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP48Q86UV5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP48Q86UV5 Z95327.1-201ENST00000446082 482 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 AC114755.5-201ENST00000447760 831 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 AL353691.1-201ENST00000451332 387 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.67□□□□□ -1.5
USP48Q86UV5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.67□□□□□ -1.5
USP48Q86UV5 AC091951.2-201ENST00000500762 203 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 AC008628.2-201ENST00000502605 298 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.67□□□□□ -1.5
USP48Q86UV5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.67□□□□□ -1.5
USP48Q86UV5 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.67□□□□□ -1.5
USP48Q86UV5 RNU6-1281P-201ENST00000516223 105 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 IGLVIV-65-201ENST00000517313 360 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.67□□□□□ -1.5
USP48Q86UV5 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.67□□□□□ -1.5
USP48Q86UV5 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.67□□□□□ -1.5
USP48Q86UV5 PTP4A1P6-201ENST00000531034 478 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 GLYCAM1-201ENST00000546596 285 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.67□□□□□ -1.5
USP48Q86UV5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.67□□□□□ -1.5
USP48Q86UV5 AL355812.1-201ENST00000603215 216 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.67□□□□□ -1.5
USP48Q86UV5 AL020991.1-201ENST00000612314 373 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 Y_RNA.804-201ENST00000615262 101 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 AC063943.3-201ENST00000615562 356 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 AP000843.1-201ENST00000624880 701 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP48Q86UV5 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP48Q86UV5 CASC19-280ENST00000642102 1351 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
USP48Q86UV5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP48Q86UV5 AC008079.2-201ENST00000623543 20396 ntBASIC5.67□□□□□ -1.5
USP48Q86UV5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
USP48Q86UV5 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP48Q86UV5 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP48Q86UV5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP48Q86UV5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP48Q86UV5 AC022893.2-201ENST00000564832 3296 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
USP48Q86UV5 Y_RNA.38-201ENST00000362617 102 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 RNU6-1322P-201ENST00000364309 107 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 RNU6-339P-201ENST00000384310 107 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 snosnR66.1-201ENST00000391095 99 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 AMD1P2-201ENST00000412936 992 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 AC140479.3-201ENST00000418944 1126 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 AC137499.1-201ENST00000427602 88 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 AC092162.1-201ENST00000432828 434 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 HMGB3P12-201ENST00000438745 556 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.66□□□□□ -1.5
USP48Q86UV5 UBDP1-202ENST00000457888 382 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 RN7SL303P-201ENST00000469773 251 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 RNU1-6P-201ENST00000516290 144 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.66□□□□□ -1.5
USP48Q86UV5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.66□□□□□ -1.5
USP48Q86UV5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.66□□□□□ -1.5
USP48Q86UV5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.66□□□□□ -1.5
USP48Q86UV5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP48Q86UV5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.66□□□□□ -1.5
USP48Q86UV5 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.66□□□□□ -1.5
USP48Q86UV5 AC007621.1-201ENST00000604544 437 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 AC090948.1-201ENST00000607464 549 ntBASIC5.66□□□□□ -1.5
USP48Q86UV5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP48Q86UV5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms