Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC091163.3-201ENST00000518269 1144 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 RNA5SP108-201ENST00000605921 117 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 AC090772.4-201ENST00000623599 362 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 OR4G3P-201ENST00000633500 913 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 ELF2P3-201ENST00000445099 1506 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4□□□□□ -1.77
NPHP3Q7Z494 RNU6-1151P-201ENST00000384684 107 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 RPL7P27-201ENST00000403775 720 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 PAICSP7-201ENST00000419829 962 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4□□□□□ -1.77
NPHP3Q7Z494 AC004854.1-201ENST00000440356 349 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4□□□□□ -1.77
NPHP3Q7Z494 RAB11AP1-201ENST00000442978 646 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4□□□□□ -1.77
NPHP3Q7Z494 AC244505.3-201ENST00000454598 187 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 AC010468.1-201ENST00000461022 817 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4□□□□□ -1.77
NPHP3Q7Z494 AC146507.1-201ENST00000468335 354 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPHP3Q7Z494 SNX5P1-201ENST00000505757 1041 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 AC096571.1-202ENST00000506634 735 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 RNU6-416P-201ENST00000516265 103 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPHP3Q7Z494 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4□□□□□ -1.77
NPHP3Q7Z494 AC087897.1-201ENST00000550134 156 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4□□□□□ -1.77
NPHP3Q7Z494 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4□□□□□ -1.77
NPHP3Q7Z494 AGGF1P8-201ENST00000562979 1000 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 C2orf27A-204ENST00000623058 969 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4□□□□□ -1.77
NPHP3Q7Z494 MIR7153-201ENST00000637758 57 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4□□□□□ -1.77
NPHP3Q7Z494 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
NPHP3Q7Z494 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPHP3Q7Z494 AL133412.1-201ENST00000380194 2992 ntBASIC4□□□□□ -1.77
NPHP3Q7Z494 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPHP3Q7Z494 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4□□□□□ -1.77
NPHP3Q7Z494 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
NPHP3Q7Z494 RNU6-859P-201ENST00000362728 107 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 RPS7P13-201ENST00000413955 498 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 USP9YP21-201ENST00000420603 432 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC092634.2-201ENST00000428146 1010 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 RPL21P112-201ENST00000434403 463 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 RPS12P18-201ENST00000442381 270 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 GTF2IP9-201ENST00000502460 301 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 RNU6-488P-201ENST00000515918 99 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 RNU4-60P-201ENST00000517239 135 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC104417.1-201ENST00000523974 751 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 NIFKP8-201ENST00000560500 874 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 MTCYBP28-201ENST00000566728 1132 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC015871.2-201ENST00000603605 948 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC073387.2-201ENST00000604797 784 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC004825.2-201ENST00000616634 455 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC011978.2-201ENST00000569835 2054 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 AC025263.3-201ENST00000622965 1396 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHP3Q7Z494 MTND5P28-201ENST00000438005 1594 ntBASIC3.99□□□□□ -1.77
NPHP3Q7Z494 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 RNU6-1243P-201ENST00000364028 107 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 MIR9-1-201ENST00000385198 89 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 MIR887-201ENST00000401258 79 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 BTF3P8-201ENST00000414577 526 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AL449283.1-202ENST00000418249 604 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 ARL5AP4-201ENST00000430731 512 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 RPS20P5-201ENST00000434808 360 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC234064.1-201ENST00000436312 247 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 EXOSC3P1-201ENST00000448649 500 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 FDX1P2-201ENST00000450769 375 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 SNRPGP5-201ENST00000456003 220 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 RPS20P32-201ENST00000456044 356 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 RPS15AP1-201ENST00000457423 391 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 HMGB3P30-201ENST00000457863 606 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 HSPE1P6-201ENST00000479457 291 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 UBE2V1P12-201ENST00000503954 474 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC091860.1-201ENST00000505723 432 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms