Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 AC006115.2-201ENST00000596823 202 ntBASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 AL355816.1-201ENST00000607951 118 ntBASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 AC064801.1-201ENST00000612025 407 ntBASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 AL359547.2-201ENST00000615810 418 ntBASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
LYSMD3Q7Z3D4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 XIAPP3-201ENST00000312918 795 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 SNORA51.1-201ENST00000363243 140 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 RNY1-201ENST00000364228 113 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 SNORD82-201ENST00000365530 70 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 RNU6-729P-201ENST00000384399 107 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 MIR517A-201ENST00000385001 87 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 RNA5SP36-201ENST00000410197 133 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 RPL21P38-201ENST00000418090 167 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 C4BPAP2-201ENST00000428434 478 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AL590399.4-201ENST00000436561 601 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AL445665.1-202ENST00000452436 324 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 FRG2FP-204ENST00000453982 852 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AC087385.1-201ENST00000475062 312 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 UBA52P7-201ENST00000486088 380 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 SNORA70.20-201ENST00000516848 126 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AP001922.4-201ENST00000526967 290 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AC010620.2-201ENST00000600135 313 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 MIR6768-201ENST00000610734 72 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AP001282.2-201ENST00000616149 309 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LYSMD3Q7Z3D4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AC027287.1-201ENST00000553115 1453 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 Y_RNA.105-201ENST00000363182 111 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 Y_RNA.151-201ENST00000363566 112 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 U3.10-201ENST00000364459 214 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AC069218.2-201ENST00000411665 344 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AL358176.3-201ENST00000420757 454 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AC234779.1-201ENST00000425910 285 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AL360081.1-201ENST00000428299 555 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 MTCO3P29-201ENST00000432119 779 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AL161636.2-201ENST00000445179 927 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 RPL32P33-201ENST00000487023 394 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 MIR4260-201ENST00000583107 67 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 VN1R91P-201ENST00000594377 169 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AC012669.1-201ENST00000603209 283 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AC109309.2-201ENST00000612597 332 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms