Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC005332.5-201ENST00000591222 2919 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC021146.4-201ENST00000309229 279 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC011155.1-201ENST00000316512 456 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 MIR133A2-201ENST00000347538 102 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 Y_RNA.46-201ENST00000362695 102 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-146P-201ENST00000384602 108 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AL356057.3-201ENST00000402607 340 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 Y_RNA.605-201ENST00000410577 105 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 NDUFB4P5-201ENST00000415445 361 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 BNIP3P2-201ENST00000441221 577 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 NUTF2P3-201ENST00000448540 384 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-329P-201ENST00000459618 107 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 MRPS17P3-201ENST00000465453 385 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 RN7SL810P-201ENST00000493031 276 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC025164.1-201ENST00000496249 478 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC017037.1-201ENST00000508460 471 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC034159.1-201ENST00000513885 583 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 RNU4-49P-201ENST00000516080 140 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 MIR2116-201ENST00000517221 80 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 PDCD5P1-201ENST00000543528 309 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC100830.2-201ENST00000581636 240 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC017100.2-201ENST00000584628 355 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC093227.2-201ENST00000589357 285 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC009237.17-201ENST00000618111 748 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AL161637.1-201ENST00000622380 412 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 AL451142.2-201ENST00000429076 2090 ntBASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 RNU5E-1-201ENST00000362477 120 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-1120P-201ENST00000362988 108 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 SNORA37-201ENST00000384504 129 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 SNORA48.7-201ENST00000391302 135 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 SDHCP2-201ENST00000398565 501 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 PRRC2CP1-201ENST00000404428 159 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC011933.1-201ENST00000413334 321 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC113618.1-201ENST00000416747 285 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 SRIP2-201ENST00000428470 166 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC011998.1-201ENST00000433403 117 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 PRPF38AP1-201ENST00000451976 933 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 RNU7-136P-201ENST00000458819 69 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC116533.1-201ENST00000459748 321 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 MTND4P17-201ENST00000470444 350 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 UBA52P3-201ENST00000491303 382 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 MTND4LP22-201ENST00000508209 276 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-488P-201ENST00000515918 99 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 SNORD60.2-201ENST00000516883 86 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-1314P-201ENST00000517139 104 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC010680.4-201ENST00000605334 543 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AL445567.2-201ENST00000618935 498 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC015908.5-201ENST00000623289 343 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AC040168.1-201ENST00000623594 991 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 AP000843.1-201ENST00000624880 701 ntBASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNKSR3Q6P9H4 TCP11X1-202ENST00000622971 1372 ntBASIC5.04□□□□□ -1.6
CNKSR3Q6P9H4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNKSR3Q6P9H4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNKSR3Q6P9H4 RIOK3P1-201ENST00000418778 1528 ntBASIC5.04□□□□□ -1.6
CNKSR3Q6P9H4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms