Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC011005.2-201ENST00000487324 359 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 TXNP6-201ENST00000510190 310 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC006427.1-201ENST00000514359 712 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 RNU7-51P-201ENST00000516560 62 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 RNU6-255P-201ENST00000516957 105 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC011979.2-201ENST00000527568 352 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 OR11H5P-201ENST00000554039 926 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 HSBP1P1-201ENST00000555205 166 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC017100.2-201ENST00000584628 355 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 MTND4LP5-201ENST00000605152 292 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC232271.1-201ENST00000602455 2715 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 OR56A5-201ENST00000340110 738 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 RNU6-562P-201ENST00000362731 107 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 RNU6-641P-201ENST00000384006 107 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 SNORA70.9-201ENST00000384370 135 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 ARF4P3-201ENST00000397387 509 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 AC119751.6-201ENST00000416712 186 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 AC243428.1-201ENST00000421099 264 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 C4BPAP2-201ENST00000428434 478 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 FTLP19-201ENST00000433300 394 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 AL132765.1-201ENST00000434165 553 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 FTH1P25-201ENST00000447665 469 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 AL353752.1-201ENST00000454946 260 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 RN7SL385P-201ENST00000468873 276 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 RPS23P3-201ENST00000470993 430 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 RNU6-488P-201ENST00000515918 99 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 IGKV2-36-201ENST00000519999 223 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 AC091042.1-201ENST00000579213 173 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 AL391358.1-201ENST00000605342 190 ntBASIC6.6□□□□□ -1.35
RC3H1Q5TC82 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.6□□□□□ -1.35
RC3H1Q5TC82 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AP001284.1-201ENST00000528393 2118 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AC002525.1-201ENST00000624392 1622 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 Y_RNA.29-201ENST00000362570 113 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 RNU6-1159P-201ENST00000362933 107 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 MIR450B-201ENST00000401182 78 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 RN7SKP235-201ENST00000410662 305 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AC073465.2-201ENST00000440938 498 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AL162388.1-201ENST00000450912 352 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 MTCO3P2-201ENST00000457365 171 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AC079804.1-201ENST00000461922 436 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 SNRPCP3-201ENST00000474888 476 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 RNU6-120P-201ENST00000516077 103 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 RNA5SP43-201ENST00000516559 110 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 RN7SKP92-201ENST00000517266 244 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 SETP7-201ENST00000552169 453 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AC022884.3-201ENST00000579571 248 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AC006254.3-201ENST00000603353 884 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AC105254.2-201ENST00000603636 436 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AL031176.1-201ENST00000604554 466 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AL031666.3-201ENST00000609320 1006 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms