Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MTND4P12-201ENST00000498999 1377 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AL353746.1-201ENST00000566293 6881 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 YWHAEP5-201ENST00000431545 765 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 RPS29P11-201ENST00000496507 171 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC112673.1-201ENST00000513168 575 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 SNORA31.1-201ENST00000515993 133 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 SNORA31.5-201ENST00000516190 133 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 ICE2P2-201ENST00000483823 2787 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 TTC39DP-201ENST00000416781 1688 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC010469.1-201ENST00000463864 576 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC084373.1-201ENST00000603311 235 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC010378.1-201ENST00000619270 362 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AL133216.2-202ENST00000634512 349 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 RNA5SP31-201ENST00000411144 127 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC008277.2-201ENST00000605196 797 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 uc_338.5-201ENST00000611839 155 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC108479.2-201ENST00000617314 601 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC005332.5-201ENST00000591222 2919 ntBASIC1.35□□□□□ -2.19
UBR4Q5T4S7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 EZH2P1-201ENST00000431167 291 ntBASIC1.35□□□□□ -2.19
UBR4Q5T4S7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 RMST_8.1-201ENST00000610287 165 ntBASIC1.35□□□□□ -2.19
UBR4Q5T4S7 CR589904.2-201ENST00000612533 440 ntBASIC1.35□□□□□ -2.19
UBR4Q5T4S7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AC130650.2-201ENST00000618736 2403 ntBASIC1.35□□□□□ -2.19
UBR4Q5T4S7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AC003982.1-202ENST00000469928 248 ntBASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 ARL5AP2-201ENST00000444698 533 ntBASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AC006390.1-201ENST00000508068 283 ntBASIC1.35□□□□□ -2.19
UBR4Q5T4S7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
UBR4Q5T4S7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.35□□□□□ -2.19
UBR4Q5T4S7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 AL365396.1-201ENST00000430854 671 ntBASIC1.34□□□□□ -2.19
UBR4Q5T4S7 AC010307.1-201ENST00000467206 836 ntBASIC1.34□□□□□ -2.19
UBR4Q5T4S7 AC108734.3-201ENST00000481241 1165 ntBASIC1.34□□□□□ -2.19
UBR4Q5T4S7 BTF3L4P4-201ENST00000506381 449 ntBASIC1.34□□□□□ -2.19
UBR4Q5T4S7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 AC015813.4-201ENST00000610469 179 ntBASIC1.34□□□□□ -2.19
UBR4Q5T4S7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 Y_RNA.35-201ENST00000362601 101 ntBASIC1.34□□□□□ -2.19
UBR4Q5T4S7 AC006989.1-201ENST00000427212 131 ntBASIC1.34□□□□□ -2.19
UBR4Q5T4S7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 OR7A8P-201ENST00000595427 913 ntBASIC1.34□□□□□ -2.19
UBR4Q5T4S7 AC006023.2-201ENST00000609916 167 ntBASIC1.34□□□□□ -2.19
UBR4Q5T4S7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
UBR4Q5T4S7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms