Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AL592182.3-201ENST00000642132 3304 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AL645937.1-201ENST00000641739 1652 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 Y_RNA.41-201ENST00000362646 102 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 RNA5SP515-201ENST00000364570 118 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 RNU6-1181P-201ENST00000384191 106 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 MIR659-201ENST00000384963 97 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 RPS3AP36-201ENST00000398190 775 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 Z98745.1-201ENST00000402553 494 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 FCF1P9-201ENST00000412546 282 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AL356387.2-201ENST00000422272 243 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC092832.1-201ENST00000422934 400 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 RPL23AP38-201ENST00000423801 469 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC104651.2-201ENST00000447549 528 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 HMGN2P21-201ENST00000447764 270 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AL359385.1-201ENST00000456509 365 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 RBM43P1-201ENST00000476891 1081 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 RNA5SP446-201ENST00000515955 82 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 IGLVIV-65-201ENST00000517313 360 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 IGLV3-26-201ENST00000520756 302 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 DEFB108A-201ENST00000530110 222 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AL133271.1-201ENST00000538229 291 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AL121834.1-201ENST00000572284 509 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 MIR3160-1-201ENST00000577972 85 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC108747.1-201ENST00000609508 535 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC245517.5-201ENST00000611529 162 ntBASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC144BQ3MJ40 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 DDX10P1-201ENST00000448545 1933 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 RNA5SP235-201ENST00000365411 114 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 RNA5SP151-201ENST00000365632 117 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 MIR135A2-201ENST00000384854 100 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 MIR921-201ENST00000401133 56 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 GSTA9P-201ENST00000406231 611 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 RNU2-43P-201ENST00000410306 190 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 RNU4-65P-201ENST00000410473 140 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC019097.1-201ENST00000424783 735 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 USP9YP7-201ENST00000436723 430 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 USP9YP32-201ENST00000452432 430 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 MTCO3P20-201ENST00000454926 688 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 MTND1P5-201ENST00000517906 940 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC011979.2-201ENST00000527568 352 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 DYNLL1P4-201ENST00000549314 266 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 ZNF519P2-201ENST00000557032 169 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC010928.3-201ENST00000587712 541 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AL592295.2-201ENST00000612578 206 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 AC019226.1-201ENST00000625666 515 ntBASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
CCDC144BQ3MJ40 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC138915.3-201ENST00000562908 1389 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RNU5E-1-201ENST00000362477 120 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RNY4P16-201ENST00000364768 94 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RN7SKP226-201ENST00000364912 300 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RNU6-1074P-201ENST00000383995 104 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 Y_RNA.516-201ENST00000384541 124 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms