Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN20P56880 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN20P56880 AC012414.6-201ENST00000568241 401 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.65□□□□□ -1.83
CLDN20P56880 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN20P56880 AC068276.1-201ENST00000605793 379 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 RN7SKP299-201ENST00000606679 301 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 MIR6868-201ENST00000611215 58 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 AC084782.3-201ENST00000612282 578 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 AC025594.3-201ENST00000613068 790 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 AC091925.2-201ENST00000625059 256 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 CR381572.1-201ENST00000625098 102 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 AC025048.6-202ENST00000627667 438 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN20P56880 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN20P56880 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN20P56880 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
CLDN20P56880 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN20P56880 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN20P56880 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN20P56880 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN20P56880 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN20P56880 MARK2P15-201ENST00000432204 2186 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN20P56880 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN20P56880 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN20P56880 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN20P56880 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLDN20P56880 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN20P56880 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CLDN20P56880 RNU6-744P-201ENST00000365557 107 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 Y_RNA.436-201ENST00000384097 102 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 RNU6-1316P-201ENST00000384242 108 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 SNORD51-201ENST00000384320 80 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 RNU6-769P-201ENST00000384407 104 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 PPIAP31-201ENST00000405422 495 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AL356967.1-201ENST00000406305 431 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN20P56880 RN7SKP142-201ENST00000411236 328 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN20P56880 RPL17P12-201ENST00000413391 526 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN20P56880 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN20P56880 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.64□□□□□ -1.83
CLDN20P56880 TBCAP1-201ENST00000436520 327 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 MTCO2P7-201ENST00000446518 666 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AP000542.1-201ENST00000448473 371 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN20P56880 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLDN20P56880 snoU109.4-201ENST00000458953 143 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AP001025.2-201ENST00000490908 477 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AC023424.2-201ENST00000493479 777 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AC010424.1-201ENST00000506336 297 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN20P56880 MTND4P2-201ENST00000507767 1203 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN20P56880 FTH1P21-201ENST00000512179 511 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN20P56880 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN20P56880 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN20P56880 AC116347.2-201ENST00000514912 523 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 RPL12P22-201ENST00000519073 490 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 RFPL1S-203ENST00000539579 330 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN20P56880 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN20P56880 OR8R1P-201ENST00000543943 764 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 EEF1B2P4-201ENST00000551398 348 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN20P56880 MIR4307-201ENST00000582802 84 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 VN1R85P-201ENST00000601587 426 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AC012065.4-201ENST00000602445 679 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AC128687.1-201ENST00000605304 619 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AC092140.2-201ENST00000618027 521 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AC040168.1-201ENST00000623594 991 ntBASIC3.64□□□□□ -1.83
CLDN20P56880 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN20P56880 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN20P56880 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN20P56880 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN20P56880 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CLDN20P56880 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN20P56880 AC008725.1-201ENST00000605123 2263 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AC092447.10-201ENST00000620607 1652 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN20P56880 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CLDN20P56880 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN20P56880 MIR124-3-201ENST00000384866 87 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AC127526.1-201ENST00000417526 366 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms