Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC007686.1-201ENST00000488511 463 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH12P55289 AL358832.1-201ENST00000497800 389 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH12P55289 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH12P55289 AC008958.1-201ENST00000511047 682 ntBASIC3.8□□□□□ -1.8
CDH12P55289 SNORA18.6-201ENST00000516792 115 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AP003467.2-201ENST00000520175 319 ntBASIC3.8□□□□□ -1.8
CDH12P55289 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH12P55289 AL157394.1-201ENST00000562983 1224 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AC009101.1-201ENST00000568135 242 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH12P55289 HMGN1P30-201ENST00000589286 268 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AL451044.1-201ENST00000604867 238 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AC109347.2-201ENST00000610220 349 ntBASIC3.8□□□□□ -1.8
CDH12P55289 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH12P55289 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH12P55289 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH12P55289 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH12P55289 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH12P55289 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH12P55289 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CDH12P55289 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH12P55289 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH12P55289 PABPC1P7-201ENST00000413177 1513 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AC095050.2-201ENST00000510748 1458 ntBASIC3.79□□□□□ -1.8
CDH12P55289 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDH12P55289 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH12P55289 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH12P55289 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CDH12P55289 PNPT1P2-201ENST00000456768 2050 ntBASIC3.79□□□□□ -1.8
CDH12P55289 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CDH12P55289 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 RNU1-132P-201ENST00000364300 164 ntBASIC3.79□□□□□ -1.8
CDH12P55289 RN7SKP226-201ENST00000364912 300 ntBASIC3.79□□□□□ -1.8
CDH12P55289 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CDH12P55289 RNU6-1207P-201ENST00000384343 107 ntBASIC3.79□□□□□ -1.8
CDH12P55289 SNORA70E-201ENST00000384492 135 ntBASIC3.79□□□□□ -1.8
CDH12P55289 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH12P55289 AC078974.1-201ENST00000411597 223 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH12P55289 OR2B8P-201ENST00000432841 938 ntBASIC3.79□□□□□ -1.8
CDH12P55289 RPL22P17-201ENST00000438729 315 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH12P55289 GAPDHP17-201ENST00000449858 1001 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH12P55289 RPS29P33-201ENST00000456717 146 ntBASIC3.79□□□□□ -1.8
CDH12P55289 RPS4XP10-201ENST00000465034 731 ntBASIC3.79□□□□□ -1.8
CDH12P55289 RPL7P24-201ENST00000493052 752 ntBASIC3.79□□□□□ -1.8
CDH12P55289 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH12P55289 RNU6-27P-201ENST00000516146 107 ntBASIC3.79□□□□□ -1.8
CDH12P55289 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDH12P55289 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH12P55289 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH12P55289 DEFB109D-201ENST00000529497 240 ntBASIC3.79□□□□□ -1.8
CDH12P55289 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDH12P55289 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH12P55289 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH12P55289 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH12P55289 TVP23BP1-201ENST00000557500 617 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH12P55289 AC012417.1-201ENST00000582307 1039 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH12P55289 AC234771.5-201ENST00000600161 514 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AC025946.2-201ENST00000603398 234 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AL161729.4-201ENST00000604650 476 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AC092794.1-201ENST00000612734 582 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH12P55289 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH12P55289 AL139089.1-201ENST00000620372 975 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AP000346.3-201ENST00000622821 210 ntBASIC3.79□□□□□ -1.8
CDH12P55289 AC091925.2-201ENST00000625059 256 ntBASIC3.79□□□□□ -1.8
CDH12P55289 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 BDP1P-201ENST00000582658 1990 ntBASIC3.79□□□□□ -1.8
CDH12P55289 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH12P55289 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDH12P55289 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH12P55289 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH12P55289 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH12P55289 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CDH12P55289 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CDH12P55289 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH12P55289 AC092125.1-201ENST00000562568 1995 ntBASIC3.78□□□□□ -1.8
CDH12P55289 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH12P55289 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH12P55289 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH12P55289 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH12P55289 RNA5SP258-201ENST00000362750 119 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms