Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RN7SL432P-201ENST00000484057 298 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC079203.1-201ENST00000487972 404 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AP001086.1-201ENST00000494882 321 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCS2P54868 RPL21P131-201ENST00000497298 483 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC078918.1-201ENST00000498515 228 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCS2P54868 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC023632.1-201ENST00000518463 375 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AF279873.1-201ENST00000523393 313 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 OR5G4P-201ENST00000525251 760 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCS2P54868 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCS2P54868 LRRC6P1-201ENST00000532188 885 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AC044913.1-201ENST00000557200 430 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AC009101.1-201ENST00000568135 242 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 BPTFP1-201ENST00000579209 492 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AL158163.2-201ENST00000619110 700 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGCS2P54868 MTND4P8-201ENST00000514997 1362 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCS2P54868 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCS2P54868 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HMGCS2P54868 AC009487.2-201ENST00000420969 6821 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGCS2P54868 AC062016.1-201ENST00000355719 319 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HMGCS2P54868 PRRC2CP1-201ENST00000404428 159 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 RNU2-21P-201ENST00000410368 188 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGCS2P54868 AL592310.1-201ENST00000414330 671 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AL645937.1-202ENST00000421799 937 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 RAC1P8-201ENST00000427086 527 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGCS2P54868 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.44□□□□□ -1.86
HMGCS2P54868 NANOGP2-201ENST00000435391 727 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGCS2P54868 RPS12P18-201ENST00000442381 270 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.44□□□□□ -1.86
HMGCS2P54868 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGCS2P54868 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGCS2P54868 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.44□□□□□ -1.86
HMGCS2P54868 GAPDHP39-201ENST00000481866 979 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 MTCO3P35-201ENST00000485582 781 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 RN7SL20P-201ENST00000488827 297 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AC068305.1-201ENST00000497406 726 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGCS2P54868 AC005921.1-201ENST00000510589 286 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 NDUFB4P9-201ENST00000511646 388 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGCS2P54868 HIGD1AP6-201ENST00000521833 279 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 MTND2P26-201ENST00000528255 1029 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.44□□□□□ -1.86
HMGCS2P54868 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.44□□□□□ -1.86
HMGCS2P54868 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGCS2P54868 MIR4644-201ENST00000579929 84 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AC138761.3-201ENST00000579993 334 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 MIR4425-201ENST00000580572 84 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 MIR3124-201ENST00000582636 67 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AC008687.2-201ENST00000597865 520 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 NRBF2P5-201ENST00000603087 788 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AL035411.2-201ENST00000604022 421 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AL445435.1-201ENST00000604232 665 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AL450336.1-201ENST00000605180 586 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AL591516.1-201ENST00000611326 274 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AC012531.5-201ENST00000611375 151 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AL592148.2-201ENST00000612210 372 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 AC073476.4-201ENST00000628409 72 ntBASIC3.44□□□□□ -1.86
HMGCS2P54868 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGCS2P54868 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HMGCS2P54868 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HMGCS2P54868 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HMGCS2P54868 AC000367.1-201ENST00000452711 1766 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGCS2P54868 AC066616.2-201ENST00000559334 1481 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HMGCS2P54868 MTND4P10-201ENST00000446199 1363 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HMGCS2P54868 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HMGCS2P54868 RNU6-707P-201ENST00000364647 95 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 SNORD116-12-201ENST00000384468 92 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 RNU6-1151P-201ENST00000384684 107 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 RNU6-1242P-201ENST00000391052 103 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 MTND4LP20-201ENST00000402379 270 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 BTBD10P2-201ENST00000404779 676 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 AL355379.1-201ENST00000405542 640 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 MIR1250-201ENST00000408098 113 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 MIR1183-201ENST00000408856 89 ntBASIC3.43□□□□□ -1.86
HMGCS2P54868 RNU6-272P-201ENST00000411028 104 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms